RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LRRC34Q8IZ02 419 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 KIRREL3Q8IZU9 778 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 MIPOL1Q8TD10 442 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ABHD3Q8WU67 409 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF350Q9GZX5 532 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF226Q9NYT6 803 aa17.23■□□□□ 0.35
SMARCB1-204ENST00000407422 ARID1AO14497 2285 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 UQCRHLA0A096LP55 91 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 E9PBE3 544 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 EIF4E2O60573 245 aaKnown RBP17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 AK1P00568 194 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 CD99P14209 185 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 CRYGSP22914 178 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 FUT5Q11128 374 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 SKP2Q13309 424 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 QPRTQ15274 297 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 MAPK14Q16539 360 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 ZNF239Q16600 458 aaKnown RBP17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 SAXO2Q658L1 398 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 OGFOD2Q6N063 350 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 VPS37AQ8NEZ2 397 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 XAGE5Q8WWM1 108 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 WDR55Q9H6Y2 383 aaPredicted RBP17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 C12orf49Q9H741 205 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 COQ10BQ9H8M1 238 aa17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 MARCOQ9UEW3 520 aaPredicted RBP17.22■□□□□ 0.35
SMARCB1-204ENST00000407422 GOLGA8QA0A0J9YX86 632 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 GOLGA8OA6NCC3 632 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 GOLGA8NF8WBI6 632 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 SNNO75324 88 aaPredicted RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 CYP7B1O75881 506 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 CD53P19397 219 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 KLK2P20151 261 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 EPHA3P29320 983 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 IL12AP29459 219 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 AGTR1P30556 359 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 S100A3P33764 101 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 CLNS1AP54105 237 aaKnown RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 STAC2Q6ZMT1 411 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 TOR1AIP2Q8NFQ8 470 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 RNF128Q8TEB7 428 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 PIK3IP1Q96FE7 263 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 MARK4Q96L34 752 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 MRGPRX4Q96LA9 322 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 THUMPD3Q9BV44 507 aaKnown RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 GLRX2Q9NS18 164 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 EXD2Q9NVH0 621 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 AIG1Q9NVV5 245 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 PRAMEF27A3QJZ7 478 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 BCAS1O75363 584 aaPredicted RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 THBDP07204 575 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 UBTFL6P0CB48 400 aaPredicted RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 KITP10721 976 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 RIPPLY3P57055 190 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 ADAM8P78325 824 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 CBFBQ13951 182 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 DPY19L1Q2PZI1 675 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 SLC25A53Q5H9E4 307 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 TYW3Q6IPR3 259 aaKnown RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 HMGN2P46Q86SG4 172 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 ZFP90Q8TF47 636 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 CPNE4Q96A23 557 aaPredicted RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 ZG16BQ96DA0 208 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 NEURL3Q96EH8 262 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 HS3ST6Q96QI5 342 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 SLC35A5Q9BS91 424 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 LAT2Q9GZY6 243 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 QRSL1Q9H0R6 528 aaKnown RBP17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 TIGARQ9NQ88 270 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 THAP1Q9NVV9 213 aa17.21■□□□□ 0.35
SMARCB1-204ENST00000407422 DSCAMO60469 2012 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 GJE1A6NN92 205 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 ETV2O00321 342 aaPredicted RBP17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 KIAA0513O60268 411 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 DNAJA2O60884 412 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 CSTAP01040 98 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 CHI3L1P36222 383 aaPredicted RBP17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 MAGOHP61326 146 aaKnown RBP17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 FOXD4Q12950 439 aaPredicted RBP17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 TIGD2Q4W5G0 525 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 GTF2IRD2BQ6EKJ0 949 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 GTF2IRD2Q86UP8 949 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 ROPN1LQ96C74 230 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 REXO5Q96IC2 774 aaKnown RBP17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 CCDC115Q96NT0 180 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 INPP5KQ9BT40 448 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 WDR45Q9Y484 360 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 GPR45Q9Y5Y3 372 aa17.2■□□□□ 0.34
SMARCB1-204ENST00000407422 IGHV3-15A0A0B4J1V0 119 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 A0A1W2PNR3 127 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 HDAC3O15379 428 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 AGR2O95994 175 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 ENPP1P22413 925 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 LOXP28300 417 aaPredicted RBP17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 PPP2R2AP63151 447 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 SELENBP1Q13228 472 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 ATAD3BQ5T9A4 648 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 FRRS1Q6ZNA5 592 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 FCRLAQ7L513 359 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 NUFIP2Q7Z417 695 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms