RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 WNT3P56703 355 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 DLX2Q07687 328 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TBC1D25Q3MII6 688 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 RNASE12Q5GAN4 147 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 FAHD1Q6P587 224 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 P4HA3Q7Z4N8 544 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 GDF7Q7Z4P5 450 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF547Q8IVP9 402 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 ENTHD1Q8IYW4 607 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 CA13Q8N1Q1 262 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 JAGN1Q8N5M9 183 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SAMD12Q8N8I0 201 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 GPBAR1Q8TDU6 330 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 NEK7Q8TDX7 302 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TNFAIP8L1Q8WVP5 186 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 NXPE2Q96DL1 559 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 FRMD6Q96NE9 622 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SDF2Q99470 211 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 PITX2Q99697 317 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 RNF121Q9H920 327 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 CPNE5Q9HCH3 593 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 C2orf42Q9NWW7 574 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 KCMF1Q9P0J7 381 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 AASSQ9UDR5 926 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TMPRSS11EQ9UL52 423 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 DHDHQ9UQ10 334 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 PCDHGA10Q9Y5H3 936 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TRPM7Q96QT4 1865 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1B0GWA3 101 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1W2PPL8 197 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 YY2O15391 372 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 CDC40O60508 579 aaKnown RBP eCLIP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SMIM18P0DKX4 95 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 NME1P15531 152 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 MSX1P28360 303 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 CD1CP29017 333 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 PTGER1P34995 402 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 FRKP42685 505 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 STT3AP46977 705 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC6A9P48067 706 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 POLR2HP52434 150 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TPTEP56180 551 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 RELAQ04206 551 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TLE3Q04726 772 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SMCO1Q147U7 214 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 DUSP5Q16690 384 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 DUSP7Q16829 419 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TBPL2Q6SJ96 375 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF704Q6ZNC4 412 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC46A3Q7Z3Q1 461 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 TPRA1Q86W33 373 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SPNS2Q8IVW8 549 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 FBXL6Q8N531 539 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 EID2Q8N6I1 236 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF283Q8N7M2 679 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 ANKRD53Q8N9V6 530 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 RNASE11Q8TAA1 199 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SETD6Q8TBK2 473 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 THAP3Q8WTV1 239 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 CREB3L1Q96BA8 519 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC35A4Q96G79 324 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SENP5Q96HI0 755 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 DUSP21Q9H596 190 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 PRDM7Q9NQW5 492 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC39A1Q9NY26 324 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 USP36Q9P275 1121 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 PTRH2Q9Y3E5 179 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 CORINQ9Y5Q5 1042 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 PTPRFP10586 1907 aa4.41□□□□□ -1.7
PCDH11X-207ENST00000406881 MYO7AQ13402 2215 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 OR6C76A6NM76 312 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 MBTPS2O43462 519 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 DNAJB6O75190 326 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 PRKRAO75569 313 aaKnown RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 SCGNO76038 276 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 GABARAPO95166 117 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 UTS2O95399 124 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 ST6GAL1P15907 406 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 FKBP2P26885 142 aaKnown RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 HTR1FP30939 366 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC5A2P31639 672 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 IDUAP35475 653 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 ACVR1BP36896 505 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 MAP2K3P46734 347 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 OR3A3P47888 321 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 OR3A2P47893 321 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 RNF144AP50876 292 aaPredicted RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 BMXP51813 675 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 PHC1P78364 1004 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 RAE1P78406 368 aaKnown RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 MAT1AQ00266 395 aaKnown RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 HOXC5Q00444 222 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 PLP2Q04941 152 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 C17orf67Q0P5P2 114 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 ARL6IP1Q15041 203 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 ABHD17BQ5VST6 288 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 RAET1LQ5VY80 246 aa4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 FAM109BQ6ICB4 259 aaPredicted RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 C8orf82Q6P1X6 216 aaPredicted RBP4.4□□□□□ -1.7
PCDH11X-207ENST00000406881 TMEM53Q6P2H8 277 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms