RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 B3GLCTQ6Y288 498 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 TMEM43Q9BTV4 400 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 LMF2Q9BU23 707 aaKnown RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 RBFOX1Q9NWB1 397 aaKnown RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 HAO2Q9NYQ3 351 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 FANCMQ8IYD8 2048 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 ZC3H12DA2A288 527 aaKnown RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 CBX7O95931 251 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 ZNF3P17036 446 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 MLLT3P42568 568 aaPredicted RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 VSX2P58304 361 aaPredicted RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 RPS7P62081 194 aaKnown RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 HBMQ6B0K9 141 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 PLET1Q6UQ28 207 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 GATAD2AQ86YP4 633 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 OR52R1Q8NGF1 315 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 PATE1Q8WXA2 126 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 UBL7Q96S82 380 aaPredicted RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 MEPEQ9NQ76 525 aaPredicted RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 CLEC1BQ9P126 229 aa21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 SIRT4Q9Y6E7 314 aaPredicted RBP21.35■■□□□ 1.01
RABGGTA-202ENST00000399409 SGK494L7N484 410 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 RFXAPO00287 272 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 POU4F2Q12837 409 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 ADAM15Q13444 863 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 ZNHIT3Q15649 155 aaPredicted RBP21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 OOSP2Q86WS3 158 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 DUSP18Q8NEJ0 188 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 CNOT9Q92600 299 aaKnown RBP21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 TBX5Q99593 518 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 TRANK1O15050 2925 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 PLPP2O43688 288 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 OR10H2O60403 315 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 SLC2A5P22732 501 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 SLC6A6P31641 620 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 ACTC1P68032 377 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 ACTA1P68133 377 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 PLAURQ03405 335 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 P2RY14Q15391 338 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 SF3A2Q15428 464 aaKnown RBP21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 RTL4Q6ZR62 310 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 TPRA1Q86W33 373 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 ART5Q96L15 291 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 MALT1Q9UDY8 824 aa21.34■■□□□ 1.01
RABGGTA-202ENST00000399409 LRP4O75096 1905 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 A0A1B0GWA3 101 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 FAM25AB3EWG3 89 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 FAM25CB3EWG5 89 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 FAM25GB3EWG6 89 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 REM1O75628 298 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 IFNGP01579 166 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 SBK2P0C263 348 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 PEPDP12955 493 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 TMEM92Q6UXU6 159 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 ABI3BPQ7Z7G0 1075 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 OR13H1Q8NG92 308 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 GRHL3Q8TE85 626 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 ZNF426Q9BUY5 554 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 OR51V1Q9H2C8 321 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 FLRT3Q9NZU0 649 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 MSRAQ9UJ68 235 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 PIAS3Q9Y6X2 628 aa21.33■■□□□ 1.01
RABGGTA-202ENST00000399409 CSF2P04141 144 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 S100A1P23297 94 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 GAS6Q14393 721 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 ARHGAP11AQ6P4F7 1023 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 ZAR1Q86SH2 424 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 Q8N9G6 341 aaPredicted RBP21.32■■□□□ 1
RABGGTA-202ENST00000399409 SLC37A2Q8TED4 501 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 LRFN5Q96NI6 719 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 ADGRL4Q9HBW9 690 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 B3GAT2Q9NPZ5 323 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 TRAV27A0A087WT01 109 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 PRAMEF26H0Y7S4 382 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 TRIM3O75382 744 aaPredicted RBP21.32■■□□□ 1
RABGGTA-202ENST00000399409 SEMA4FO95754 770 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 INPP1P49441 399 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 SLC16A1P53985 500 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 ZNF362Q5T0B9 420 aaPredicted RBP21.32■■□□□ 1
RABGGTA-202ENST00000399409 IDNKQ5T6J7 187 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 OAFQ86UD1 273 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 LSMEM1Q8N8F7 131 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 OR51A7Q8NH64 312 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 KCNJ15Q99712 375 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 FOLH1BQ9HBA9 442 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 LAMA3Q16787 3333 aa21.32■■□□□ 1
RABGGTA-202ENST00000399409 TCRBV21S2A2A0A5A6 115 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 OR5K3A6NET4 321 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 LYRM1O43325 122 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 RDH16O75452 317 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 CHRNB1P11230 501 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 ARMC6Q6NXE6 501 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 ARL9Q6T311 187 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 LRRC28Q86X40 367 aaPredicted RBP21.31■■□□□ 1
RABGGTA-202ENST00000399409 SHISA5Q8N114 240 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 SEMA6CQ9H3T2 930 aa21.31■■□□□ 1
RABGGTA-202ENST00000399409 C8orf33Q9H7E9 229 aaPredicted RBP21.31■■□□□ 1
RABGGTA-202ENST00000399409 DNAJB12Q9NXW2 375 aaKnown RBP21.31■■□□□ 1
RABGGTA-202ENST00000399409 COL4A2P08572 1712 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms