RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 Q9N2J8 555 aa13.96□□□□□ -0.17
COL25A1-201ENST00000399126 SIDT1Q9NXL6 827 aaKnown RBP13.96□□□□□ -0.17
COL25A1-201ENST00000399126 CLCA3PQ9Y6N3 262 aa13.96□□□□□ -0.17
COL25A1-201ENST00000399126 CDC14CA4D256 554 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 SLC22A1O15245 554 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 ABCB7O75027 752 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 SCRG1O75711 98 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 GABRB1P18505 474 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 SELENBP1Q13228 472 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 TRAM2Q15035 370 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 AGAP7PQ5VUJ5 663 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF730Q6ZMV8 503 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 SLITRK4Q8IW52 837 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 OR4C3Q8NH37 302 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF486Q96H40 463 aaPredicted RBP13.96□□□□□ -0.18
COL25A1-201ENST00000399126 DGCR6LQ9BY27 220 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 PLA2G12AQ9BZM1 189 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 DSN1Q9H410 356 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 EGLN3Q9H6Z9 239 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 AKIRIN1Q9H9L7 192 aaPredicted RBP13.96□□□□□ -0.18
COL25A1-201ENST00000399126 CBLCQ9ULV8 474 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 CFL2Q9Y281 166 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 R4GN57 208 aa13.96□□□□□ -0.18
COL25A1-201ENST00000399126 FAM20BO75063 409 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 SLC35A2P78381 396 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 MVKQ03426 396 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 ST3GAL3Q11203 375 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 OXA1LQ15070 435 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 EIPR1Q53HC9 387 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 FAM69BQ5VUD6 431 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 LCN10Q6JVE6 187 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 C1orf94Q6P1W5 598 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 KIF18BQ86Y91 864 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 RHOXF1Q8NHV9 184 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF721Q8TF20 911 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 SLC38A4Q969I6 547 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 GAL3ST4Q96RP7 486 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 GFM1Q96RP9 751 aaKnown RBP13.95□□□□□ -0.18
COL25A1-201ENST00000399126 NUDT9Q9BW91 350 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 NXF5Q9H1B4 397 aaKnown RBP13.95□□□□□ -0.18
COL25A1-201ENST00000399126 IGKV3-11P04433 115 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 AVPR2P30518 371 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 MAP2K4P45985 399 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 GABARAPL2P60520 117 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 ESRRGP62508 458 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 AHSA2Q719I0 299 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 NRMQ8IXM6 262 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 PRR22Q8IZ63 422 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 ELMOD2Q8IZ81 293 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 IL4I1Q96RQ9 567 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 NODALQ96S42 347 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 ZPBPQ9BS86 351 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 WNT5BQ9H1J7 359 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 TP63Q9H3D4 680 aaPredicted RBP13.95□□□□□ -0.18
COL25A1-201ENST00000399126 DAPK2Q9UIK4 370 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 RARRES3Q9UL19 164 aa13.95□□□□□ -0.18
COL25A1-201ENST00000399126 D6RAR5 112 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 SYPP08247 313 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 GPR4P46093 362 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 OR1Q1Q15612 314 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 MED25Q71SY5 747 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 PMEPA1Q969W9 287 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF578Q96N58 590 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 PRSS27Q9BQR3 290 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 DCUN1D5Q9BTE7 237 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 MROQ9BYG7 248 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 NAA50Q9GZZ1 169 aaKnown RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 IMPAD1Q9NX62 359 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 DNAJB12Q9NXW2 375 aaKnown RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 NPIPB9F8W1W9 429 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 FUT1P19526 365 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 NR4A1P22736 598 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 CFL1P23528 166 aaKnown RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 ILKQ13418 452 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 TOP3AQ13472 1001 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 LIN54Q6MZP7 749 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 BCDIN3DQ7Z5W3 292 aaKnown RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 GATSQ8NAP1 163 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 GRHL3Q8TE85 626 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 PELOQ9BRX2 385 aaKnown RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 HOXD1Q9GZZ0 328 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 LHPPQ9H008 270 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 MKKSQ9NPJ1 570 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 SRPK3Q9UPE1 567 aa13.94□□□□□ -0.18
COL25A1-201ENST00000399126 COL5A1P20908 1838 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-201ENST00000399126 MPDZO75970 2070 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 LNP1A1A4G5 178 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 FAM172BPA6NC97 362 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 OR5F1O95221 314 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 LYPD3O95274 346 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 PCMT1P22061 227 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 OMPP47874 163 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 TPTEP56180 551 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ELAVL1Q15717 326 aaKnown RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 C21orf62-AS1Q17RA5 79 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 NKAIN1Q4KMZ8 207 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 RABEPKQ7Z6M1 372 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms