RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KIAA1143Q96AT1 154 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SPACA7Q96KW9 195 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 NEURL2Q9BR09 285 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 IFT27Q9BW83 186 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MKKSQ9NPJ1 570 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MEPEQ9NQ76 525 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SNTG1Q9NSN8 517 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 C20orf141Q9NUB4 165 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SERTAD3Q9UJW9 196 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ICAM5Q9UMF0 924 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CMAHPQ9Y471 501 aa16.34■□□□□ 0.21
HLA-DQB1-204ENST00000399084 NPIPA5A0A0B4J1W7 369 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SERINC4A6NH21 518 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 NPIPA7E9PJI5 369 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CTDSP2O14595 271 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 IDH3BO43837 385 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 NPIPA8P0DM63 369 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PTBP1P26599 531 aaKnown RBP eCLIP16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CD1CP29017 333 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SSTR4P31391 388 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ACTC1P68032 377 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ACTA1P68133 377 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PSPHP78330 225 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PLBD1Q6P4A8 553 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 NUP54Q7Z3B4 507 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ZAR1Q86SH2 424 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 LHFPL3Q86UP9 236 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 KMT5CQ86Y97 462 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PLXDC1Q8IUK5 500 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 POC5Q8NA72 575 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 C1orf216Q8TAB5 229 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 RNF217Q8TC41 542 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SNRNP27Q8WVK2 155 aaKnown RBP16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLC46A1Q96NT5 459 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 KCNS3Q9BQ31 491 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 BARHL1Q9BZE3 327 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 KCNN2Q9H2S1 579 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ATP13A2Q9NQ11 1180 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 IRAK4Q9NWZ3 460 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 BABAM2Q9NXR7 383 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 QPCTLQ9NXS2 382 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 FLRT3Q9NZU0 649 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SEMA5BQ9P283 1151 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 KLHL21Q9UJP4 597 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 OR10H1Q9Y4A9 318 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLCO1B1Q9Y6L6 691 aa16.33■□□□□ 0.21
HLA-DQB1-204ENST00000399084 TRIOBPQ9H2D6 2365 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TGFBR3LH3BV60 316 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PLD2O14939 933 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NUDT21O43809 227 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IGKV1D-16P01601 117 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PPICP45877 212 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DCAF7P61962 342 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 HSD11B2P80365 405 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RPL6Q02878 288 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PLAURQ03405 335 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GALEQ14376 348 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DDI2Q5TDH0 399 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 BCORP1Q8N888 145 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR4F15Q8NGB8 312 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C16orf52Q8NHV5 167 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DNASE2BQ8WZ79 361 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TEAD3Q99594 435 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ERVMER34-1Q9H9K5 563 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 EXOSC3Q9NQT5 275 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 UBQLN4Q9NRR5 601 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C2orf42Q9NWW7 574 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ZNF229Q9UJW7 825 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CA14Q9ULX7 337 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 REV3LO60673 3130 aa16.33■□□□□ 0.2
HLA-DQB1-204ENST00000399084 A0A087WUJ7 227 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IGHV5-51A0A0C4DH38 117 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TMEM150CB9EJG8 249 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 WWP2O00308 870 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RGS5O15539 181 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NTN1O95631 604 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CSTAP01040 98 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IFNA16P05015 189 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 KLHL26Q53HC5 615 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 C22orf42Q6IC83 251 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 METAP1DQ6UB28 335 aaPredicted RBP16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NPSR1Q6W5P4 371 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 EGFL6Q8IUX8 553 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ZNF614Q8N883 585 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 FAM181AQ8N9Y4 354 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SLC37A3Q8NCC5 494 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DOK4Q8TEW6 326 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TRMT61AQ96FX7 289 aaKnown RBP16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TGM7Q96PF1 710 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TRIM36Q9NQ86 728 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ERVK-19Q9WJR5 959 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NDUFB2O95178 105 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CTSBP07858 339 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PNMTP11086 282 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 F8A1P23610 371 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 BTG2P78543 158 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GPLD1P80108 840 aa16.31■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TBC1D25Q3MII6 688 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms