RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 OR1Q1Q15612 314 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 ESCO2Q56NI9 601 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MRPL2Q5T653 305 aaKnown RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 CMTM1Q8IZ96 169 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 INTS14Q96SY0 518 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 PADI1Q9ULC6 663 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 H1FXQ92522 213 aaKnown RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 HSFX1Q9UBD0 423 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 FAM189A1O60320 539 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 H2AFB2P0C5Z0 115 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 SIX1Q15475 284 aaPredicted RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 POTEKPQ9BYX7 375 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 ARNT2Q9HBZ2 717 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 K7ESM1 405 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 SLC43A1O75387 559 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 CLEC14AQ86T13 490 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 FAM174AQ8TBP5 190 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 ASB11Q8WXH4 323 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 AHRP35869 848 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 TNFRSF17Q02223 184 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MFSD9Q8NBP5 474 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MYNNQ9NPC7 610 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 GPR160Q9UJ42 338 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 AK6Q9Y3D8 172 aaKnown RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 AGAP5A6NIR3 686 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 RAB38P57729 211 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 CEACAM7Q14002 265 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 NTRK2Q16620 822 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MED25Q71SY5 747 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 WFDC5Q8TCV5 224 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 RANBP3Q9H6Z4 567 aaPredicted RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 FAM183AA6NL82 134 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 H0YAE9 185 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 C9orf50Q5SZB4 431 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 C6orf141Q5SZD1 244 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 TMEM178AQ8NBL3 297 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 OR4D6Q8NGJ1 314 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 GRPEL2Q8TAA5 225 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MBNL1Q9NR56 388 aaKnown RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 LOC285095A0A1B0GVY8 99 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 ELSPBP1Q96BH3 223 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 LSM5Q9Y4Y9 91 aaKnown RBP10.62□□□□□ -0.71
TTC28-201ENST00000397906 NME4O00746 187 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 IGHV3-9P01782 118 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 CARD18P57730 90 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 GPR85P60893 370 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 SYPL1Q16563 259 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 ZNF595Q8IYB9 648 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 ZNF681Q96N22 645 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 GPR75O95800 540 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 CSNK1DP48730 415 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 MZT1Q08AG7 82 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 COL28A1Q2UY09 1125 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 FAM26DQ5JW98 314 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 BTNL2Q9UIR0 455 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 SLC6A14Q9UN76 642 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 ZNF337Q9Y3M9 751 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 OR2T1O43869 369 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 CACNG3O60359 315 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 B3GALT4O96024 378 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 HPRP00739 348 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 RUNDC3AQ59EK9 446 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 OR5D14Q8NGL3 314 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 FKBP10Q96AY3 582 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 CDC6Q99741 560 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 VN1R3Q9BXE9 311 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 F5H0A9 414 aaPredicted RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 ATG12O94817 140 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 CD27P26842 260 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 ZNF750Q32MQ0 723 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 RNASE10Q5GAN6 216 aaKnown RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 HHIPL1Q96JK4 782 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 HDAC8Q9BY41 377 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 FAM234AQ9H0X4 552 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 HS3ST2Q9Y278 367 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 TRIM64CA6NLI5 447 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 YKT6O15498 198 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 PCGF2P35227 344 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 PRDX1Q06830 199 aaKnown RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 LKAAEAR1Q8TD35 194 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 PTHP01270 115 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 IGHEP01854 428 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 PTAFRP25105 342 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 CAV2P51636 162 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 C6orf15Q6UXA7 325 aaPredicted RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 C22orf15Q8WYQ4 148 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 THAP10Q9P2Z0 257 aaPredicted RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 MRPS2Q9Y399 296 aaKnown RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 WASH4PA8MWX3 477 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 ZNF780AO75290 641 aaPredicted RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 C9orf152Q5JTZ5 239 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 OR7E24Q6IFN5 339 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
TTC28-201ENST00000397906 PAQR9Q6ZVX9 377 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 PGBD5Q8N414 524 aa10.61□□□□□ -0.71
TTC28-201ENST00000397906 PPP1R35Q8TAP8 253 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms