RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ULK3Q6PHR2 472 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 HIPK1Q86Z02 1210 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 ZDHHC13Q8IUH4 622 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 ZADH2Q8N4Q0 377 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 FADS6Q8N9I5 356 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 CATSPER1Q8NEC5 780 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 OR1J4Q8NGS1 313 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 ST8SIA1Q92185 356 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 MPP4Q96JB8 637 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 SIGLEC12Q96PQ1 595 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 NMNAT1Q9HAN9 279 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 C12orf10Q9HB07 376 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 C8orf4Q9NR00 106 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 TAS2R10Q9NYW0 307 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 NKX1-2Q9UD57 310 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 TMCC3Q9ULS5 477 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 LYVE1Q9Y5Y7 322 aa21.48■■□□□ 1.03
TSPAN4-202ENST00000397396 A0A087WZY1 265 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 KLRC4-KLRK1H3BQV0 150 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 CASQ2O14958 399 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 OIP5O43482 229 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 CHP2O43745 196 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 NME2P1O60361 137 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 CDC40O60508 579 aaKnown RBP eCLIP21.47■■□□□ 1.032e-6■■■■■ 31.7
TSPAN4-202ENST00000397396 TRIM3O75382 744 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 SP1P08047 785 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 NME2P22392 152 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 HTR3AP46098 478 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 IDH2P48735 452 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 ST13P50502 369 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 HMGA2P52926 109 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 SESN3P58005 492 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 TRIP10Q15642 601 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 TIGD3Q6B0B8 471 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 IGFL3Q6UXB1 125 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 CADM2Q8N3J6 435 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 LINC00471Q8N535 108 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 KDF1Q8NAX2 398 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 OR2M3Q8NG83 312 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 OR5K1Q8NHB7 308 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 SLC38A4Q969I6 547 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 OSBPL10Q9BXB5 764 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 SEMA6AQ9H2E6 1030 aa21.47■■□□□ 1.03
TSPAN4-202ENST00000397396 NINQ8N4C6 2090 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 TRAV17A0A0B4J275 112 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 A0A0B4J2E0 115 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 A0A1B0GWA3 101 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 A0A1B0GX12 115 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 FFAR1O14842 300 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 SEMA7AO75326 666 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 CBR3O75828 277 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 F10P00742 488 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 PNMTP11086 282 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 GP1BBP13224 206 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 ZNF23P17027 643 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 SLC1A3P43003 542 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 TNFSF10P50591 281 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 CXADRP78310 365 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 ALG10BQ5I7T1 473 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 FGD3Q5JSP0 725 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 SHQ1Q6PI26 577 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 ICA1LQ8NDH6 482 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 GPR119Q8TDV5 335 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 EME1Q96AY2 570 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 SCMH1Q96GD3 660 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 C9orf16Q9BUW7 83 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 PROK2Q9HC23 129 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 KRCC1Q9NPI7 259 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 ACER3Q9NUN7 267 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 MED11Q9P086 117 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 B4GALT7Q9UBV7 327 aa21.46■■□□□ 1.03
TSPAN4-202ENST00000397396 NCOR2Q9Y618 2525 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 C2orf72A6NCS6 295 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 GNB5O14775 395 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 ADAM11O75078 769 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 QPRTQ15274 297 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 TBR1Q16650 682 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 ZNF766Q5HY98 468 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 DCST1Q5T197 706 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 GDF7Q7Z4P5 450 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 WDSUB1Q8N9V3 476 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 FAM98AQ8NCA5 519 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 HS6ST2Q96MM7 605 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 VCXQ9H320 206 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 DSN1Q9H410 356 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 NTN4Q9HB63 628 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 CTPS2Q9NRF8 586 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 SLC7A7Q9UM01 511 aa21.45■■□□□ 1.02
TSPAN4-202ENST00000397396 ARRDC5A6NEK1 342 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 TAF4O00268 1085 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 RBM34P42696 430 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 DNASE1L1P49184 302 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 DLX5P56178 289 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 DSCR4P56555 118 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 OR5M10Q6IEU7 315 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 GRINAQ7Z429 371 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 OR2M7Q8NG81 312 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 JSRP1Q96MG2 331 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 ALPK1Q96QP1 1244 aa21.44■■□□□ 1.02
TSPAN4-202ENST00000397396 ZFP64Q9NPA5 681 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms