RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 DAP3P51398 398 aaKnown RBP11.62□□□□□ -0.55
SMU1-201ENST00000397149 RAB15P59190 212 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 ARRDC3Q96B67 414 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 LOC102725191A0A1B0GVB3 256 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 hCG_1809904A0A1W2PP81 198 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 A0A1W2PPE2 198 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 A0A1W2PR64 198 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 F6UZH7 168 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 SGK494L7N484 410 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 FOLR1P15328 257 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 KCNE1P15382 129 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 TBPP20226 339 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 TLE4Q04727 773 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 DOC2AQ14183 400 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 CRMP1Q14194 572 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 OR8G2PQ6IF36 304 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 FIGLAQ6QHK4 219 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 DERL2Q9GZP9 239 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 CLEC5AQ9NY25 188 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 RNF150Q9ULK6 438 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 HCRTO43612 131 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 PENKP01210 267 aaPredicted RBP11.62□□□□□ -0.55
SMU1-201ENST00000397149 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
SMU1-201ENST00000397149 HTR5AP47898 357 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 METTL11BQ5VVY1 283 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 TMEM130Q8N3G9 435 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 SMOQ99835 787 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 GRPP07492 148 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 SLC1A3P43003 542 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 ZNF805Q5CZA5 627 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 AVPI1Q5T686 147 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 EGLN3Q9H6Z9 239 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 CALHM2Q9HA72 323 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 OBP2AQ9NY56 170 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 CPNE7Q9UBL6 633 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 CHRNA9Q9UGM1 479 aa11.62□□□□□ -0.55
SMU1-201ENST00000397149 IGHV3-64DA0A0J9YX35 117 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 TRBV11-1A0A0K0K1C0 115 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 IL1R2P27930 398 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 TNK1Q13470 666 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF169Q14929 603 aaPredicted RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 BRIX1Q8TDN6 353 aaKnown RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 CLTCL1P53675 1640 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 GLI2P10070 1586 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF732B4DXR9 585 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 RNF224P0DH78 156 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 FKBP1BP68106 108 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 UPP1Q16831 310 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 LSMEM2Q8N112 164 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 OR56B4Q8NH76 319 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF596Q8TC21 504 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 RNF170Q96K19 258 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ALOXE3Q9BYJ1 711 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 BABAM2Q9NXR7 383 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 KRBA1A5PL33 1030 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 FRS3O43559 492 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 KCNK5O95279 499 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 RAD52P43351 418 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 OR5I1Q13606 314 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 CNKSR3Q6P9H4 555 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 SLC5A8Q8N695 610 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 OR5D18Q8NGL1 313 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 APH1AQ96BI3 265 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF599Q96NL3 588 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 SLC19A3Q9BZV2 496 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMU1-201ENST00000397149 PCDHA9Q9Y5H5 950 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 CACNG2Q9Y698 323 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 PRDM15P57071 1507 aaPredicted RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 NDUFB7P17568 137 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 CRABP1P29762 137 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 RPS5P46782 204 aaKnown RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 UBE2IP63279 158 aaKnown RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 CTSL3PQ5NE16 218 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF678Q5SXM1 525 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 C18orf63Q68DL7 685 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 CNIH2Q6PI25 160 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 SBSNQ6UWP8 590 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 APOBEC3GQ9HC16 384 aaKnown RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 LYRM1O43325 122 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 PRKYO43930 277 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 ZNF17P17021 662 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 TIA1P31483 386 aaKnown RBP eCLIP11.61□□□□□ -0.551e-8■■■■□ 20.4
SMU1-201ENST00000397149 UBE2G1P62253 170 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 MFSD12Q6NUT3 480 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 TMPRSS11FQ6ZWK6 438 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 PINX1Q96BK5 328 aaKnown RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 SEC22AQ96IW7 307 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 LURAP1Q96LR2 239 aa11.61□□□□□ -0.55
SMU1-201ENST00000397149 NKX3-1Q99801 234 aaPredicted RBP11.61□□□□□ -0.55
SMU1-201ENST00000397149 PLK3Q9H4B4 646 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms