RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 F3P13726 295 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 EPHA4P54764 986 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 UBE2NLQ5JXB2 153 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SULF2Q8IWU5 870 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MDGA1Q8NFP4 955 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OR52R1Q8NGF1 315 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 FRS2Q8WU20 508 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF597Q96LX8 424 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM246Q9BRR3 403 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 NLKQ9UBE8 527 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MEIS3P2A8K0S8 358 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 F5H5P2 479 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MEN1O00255 615 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GOSR2O14653 212 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 DCNP07585 359 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RNF144AP50876 292 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 PIP5KL1Q5T9C9 394 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 FAM180BQ6P0A1 224 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 LRRC56Q8IYG6 542 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SLC43A2Q8N370 569 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GIMAP5Q96F15 307 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CBLCQ9ULV8 474 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TPT1P13693 172 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GABRA5P31644 462 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TSFMP43897 325 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 XCR1P46094 333 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GPR157Q5UAW9 335 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OPN5Q6U736 354 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 B3GNT9Q6UX72 402 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GALNT10Q86SR1 603 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF761Q86XN6 746 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZFP41Q8N8Y5 198 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OR4K15Q8NH41 348 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 KCTD12Q96CX2 325 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TOE1Q96GM8 510 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MAP3K3Q99759 626 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SAP130Q9H0E3 1048 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 INIPQ9NRY2 104 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CNIH4Q9P003 139 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HS3ST2Q9Y278 367 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OR52A4PA6NMU1 304 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GAPDHSO14556 408 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CNOT4O95628 575 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TIMP2P16035 220 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RPL23AP62750 156 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HBA1P69905 142 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 C17orf67Q0P5P2 114 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 C6orf132Q5T0Z8 1188 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CPOQ8IVL8 374 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 NXPE3Q969Y0 559 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OR7D2Q96RA2 312 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ADOQ96SZ5 270 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TEX10Q9NXF1 929 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ATXN7L1Q9ULK2 861 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RPH3AQ9Y2J0 694 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GFRA2O00451 464 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RFPL3O75679 317 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CA5AP35218 305 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TAS2R46P59540 309 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 EEF1A1P68104 462 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 DEFB110Q30KQ9 67 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TSSK4Q6SA08 328 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 NCCRP1Q6ZVX7 275 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SLC35F3Q8IY50 421 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ADAMTS14Q8WXS8 1223 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 DCUN1D4Q92564 292 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 NICN1Q9BSH3 213 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 THAP7Q9BT49 309 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ENPP5Q9UJA9 477 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF264O43296 627 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GPR75O95800 540 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CD46P15529 392 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ETV4P43268 484 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RRADP55042 308 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 NFATC4Q14934 902 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HES5Q5TA89 166 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 UBE2UQ5VVX9 321 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MTFR2Q6P444 385 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MEPCEQ7L2J0 689 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 FAM160A2Q8N612 972 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 IQCF1Q8N6M8 205 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OR6Q1Q8NGQ2 317 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZFAND1Q8TCF1 268 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF480Q8WV37 535 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TFAP2CQ92754 450 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 PFDN5Q99471 154 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ST6GALNAC5Q9BVH7 336 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SLC25A31Q9H0C2 315 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TSPAN10Q9H1Z9 355 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SLC6A20Q9NP91 592 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CUTCQ9NTM9 273 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 B3GALT1Q9Y5Z6 326 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TRPM3Q9HCF6 1732 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 RDH16O75452 317 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 KNG1P01042 644 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PRSS56P0CW18 603 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ACP2P11117 423 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 GMPRP36959 345 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PGGT1BP53609 377 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms