RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 OR10A4Q9H209 315 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 EML4Q9HC35 981 aaKnown RBP17.11■□□□□ 0.33
COL11A2-204ENST00000395194 GPC6Q9Y625 555 aaPredicted RBP17.11■□□□□ 0.33
COL11A2-204ENST00000395194 COL6A5A8TX70 2615 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 GJE1A6NN92 205 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 CYP7B1O75881 506 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 PRKD3O94806 890 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 CD3EP07766 207 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 SOD3P08294 240 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 PAX1P15863 534 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 CDKN1AP38936 164 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 RPL3P39023 403 aaKnown RBP17.1■□□□□ 0.33
COL11A2-204ENST00000395194 ATP12AP54707 1039 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 SUMO3P55854 103 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-204ENST00000395194 RPS4XP62701 263 aaKnown RBP17.1■□□□□ 0.33
COL11A2-204ENST00000395194 C6orf136Q5SQH8 315 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 PDZK1Q5T2W1 519 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 CLEC4FQ8N1N0 589 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 KBTBD8Q8NFY9 601 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 KISS1RQ969F8 398 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-204ENST00000395194 FBXW5Q969U6 566 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 HOXD1Q9GZZ0 328 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 PRSS50Q9UI38 385 aa17.1■□□□□ 0.33
COL11A2-204ENST00000395194 RNF223E7ERA6 249 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 LYZL6O75951 148 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 YES1P07947 543 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 EDNRAP25101 427 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ADH6P28332 368 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 FAPQ12884 760 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 SELENBP1Q13228 472 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 QPRTQ15274 297 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 STK11Q15831 433 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 CLEC12BQ2HXU8 276 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 LSM12Q3MHD2 195 aaKnown RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 NCMAPQ5T1S8 102 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ADAM5Q6NVV9 412 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 BHLHA15Q7RTS1 189 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 LSRQ86X29 649 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 PSMA8Q8TAA3 256 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 SFXN5Q8TD22 340 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 GTPBP3Q969Y2 492 aaKnown RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 HDHD5Q9BXW7 423 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 QRSL1Q9H0R6 528 aaKnown RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ESRP2Q9H6T0 727 aaKnown RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ATAD3AQ9NVI7 634 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 MKS1Q9NXB0 559 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ZDHHC2Q9UIJ5 367 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ADAM21Q9UKJ8 722 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 DTNAQ9Y4J8 743 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 MAGED1Q9Y5V3 778 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-204ENST00000395194 ACTL7BQ9Y614 415 aa17.09■□□□□ 0.33
COL11A2-204ENST00000395194 CENPVL1A0A0U1RR11 272 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 ZNF814B7Z6K7 855 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 ZNF264O43296 627 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 H6PDO95479 791 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 KRT16P08779 473 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 UBL4AP11441 157 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 CASP9P55211 416 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 HBA1P69905 142 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 BSPH1Q075Z2 132 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 GPR68Q15743 365 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 CLECL1Q8IZS7 167 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
COL11A2-204ENST00000395194 TCP10LQ8TDR4 215 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 TUBGCP3Q96CW5 907 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 DNAJA3Q96EY1 480 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 MRGPRX4Q96LA9 322 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 PPP1R36Q96LQ0 422 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 OR5B2Q96R09 309 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 ZNF300Q96RE9 604 aaPredicted RBP17.08■□□□□ 0.32
COL11A2-204ENST00000395194 SDF2Q99470 211 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 PSD2Q9BQI7 771 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 DUSP26Q9BV47 211 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 SERHL2Q9H4I8 314 aa17.08■□□□□ 0.32
COL11A2-204ENST00000395194 HEATR1Q9H583 2144 aaKnown RBP17.08■□□□□ 0.32
COL11A2-204ENST00000395194 LYPLA1O75608 230 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-204ENST00000395194 KRTAP1-1Q07627 177 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 CBFBQ13951 182 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 PGS1Q32NB8 556 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 TIGD2Q4W5G0 525 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 SEZ6L2Q6UXD5 910 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 TOR1AIP2Q8NFQ8 470 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 OR5W2Q8NH69 310 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 SMAP2Q8WU79 429 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-204ENST00000395194 HSD17B8Q92506 261 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 COQ8BQ96D53 544 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 PRPF18Q99633 342 aaKnown RBP17.07■□□□□ 0.32
COL11A2-204ENST00000395194 THUMPD3Q9BV44 507 aaKnown RBP17.07■□□□□ 0.32
COL11A2-204ENST00000395194 POTEKPQ9BYX7 375 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 NGBQ9NPG2 151 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 KLHL9Q9P2J3 617 aa17.07■□□□□ 0.32
COL11A2-204ENST00000395194 ING1Q9UK53 422 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-204ENST00000395194 A0A1W2PP18 115 aa17.06■□□□□ 0.32
COL11A2-204ENST00000395194 DPRXA6NFQ7 191 aa17.06■□□□□ 0.32
COL11A2-204ENST00000395194 SERINC4A6NH21 518 aa17.06■□□□□ 0.32
COL11A2-204ENST00000395194 ESPNB1AK53 854 aa17.06■□□□□ 0.32
COL11A2-204ENST00000395194 SMAD9O15198 467 aaKnown RBP17.06■□□□□ 0.32
COL11A2-204ENST00000395194 TMCC2O75069 709 aa17.06■□□□□ 0.32
COL11A2-204ENST00000395194 DANCRP0C864 163 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms