RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CLEC12AQ5QGZ9 265 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 FNDC7Q5VTL7 733 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 SLX4IPQ5VYV7 408 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 CBLN3Q6UW01 205 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 ZNF517Q6ZMY9 492 aaPredicted RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 RASSF6Q6ZTQ3 369 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 KCTD8Q6ZWB6 473 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 TIPARPQ7Z3E1 657 aaKnown RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 PIP4P1Q86T03 277 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 WDR36Q8NI36 951 aaKnown RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 CT55Q8WUE5 264 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 DNAJA4Q8WW22 397 aaPredicted RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 ZNF566Q969W8 418 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 MPP4Q96JB8 637 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
TDP1-203ENST00000393454 DPH1Q9BZG8 443 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 PLA2G12AQ9BZM1 189 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 VCX3AQ9NNX9 186 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 AMBNQ9NP70 447 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 CLN6Q9NWW5 311 aa7.92□□□□□ -1.14
TDP1-203ENST00000393454 LOC102723996A0A087X1L8 192 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 IGHV1-45A0A0A0MS14 117 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 UNC119BA6NIH7 251 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 C9orf172C9J069 976 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 MPZL2O60487 215 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 OR6B1O95007 311 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 IGHEP01854 428 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 SAGP10523 405 aaPredicted RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 MAKP20794 623 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TGM1P22735 817 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 OTX2P32243 289 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 EVI2BP34910 448 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 GIPRP48546 466 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 SMSP52788 366 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 NUDT6P53370 316 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 RPS18P62269 152 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 ZNF117Q03924 483 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 PRKCDQ05655 676 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 NEDD8Q15843 81 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 WBP2NLQ6ICG8 309 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 CCDC103Q8IW40 242 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 POGLUT1Q8NBL1 392 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FAM71CQ8NEG0 241 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 OR8K3Q8NH51 312 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 OSTF1Q92882 214 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TMCO6Q96DC7 493 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 BPIFA2Q96DR5 249 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 NODALQ96S42 347 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TSSK6Q9BXA6 273 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 RTN4RQ9BZR6 473 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FAM192AQ9GZU8 254 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 LAT2Q9GZY6 243 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ZNF700Q9H0M5 742 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 C20orf141Q9NUB4 165 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TBC1D23Q9NUY8 699 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FOXJ2Q9P0K8 574 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ERVK-18Q9QC07 812 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 MYOTQ9UBF9 498 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TMEM5Q9Y2B1 443 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 HS3ST3B1Q9Y662 390 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 KNTC1P50748 2209 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 SPAARA0A1B0GVQ0 90 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 A0A1W2PNU3 283 aaPredicted RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 A0A1W2PQD3 144 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TMEM200CA6NKL6 621 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ELOA3DA6NLF2 546 aaPredicted RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 C17orf51A8MQB3 221 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 EFCAB9A8MZ26 197 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ALG1L2C9J202 215 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 CDC42EP2O14613 210 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FADS1O60427 444 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ZNF354AO60765 605 aaPredicted RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 OR2J2O76002 312 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TNFSF15O95150 251 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 DLGAP3O95886 979 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 NGFRP08138 427 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 CELA2AP08217 269 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 COX6A1P12074 109 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FUT1P19526 365 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ENDOUP21128 410 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 RBM34P42696 430 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 SLC6A8P48029 635 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 RPS15P62841 145 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 CSNK2BP67870 215 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 CRYZQ08257 329 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 EXT1Q16394 746 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 SNAPC1Q16533 368 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ELOA3BQ3SY89 546 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FOXB2Q5VYV0 432 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 C12orf73Q69YU5 71 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ACSM5Q6NUN0 579 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 SLC27A4Q6P1M0 643 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TCEANCQ8N8B7 351 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 ELOA3Q8NG57 546 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 SLC22A8Q8TCC7 542 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 DUSP19Q8WTR2 217 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TMIGD2Q96BF3 282 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 RHNO1Q9BSD3 238 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TEX12Q9BXU0 123 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms