RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ATG4DQ86TL0 474 aaPredicted RBP12.02□□□□□ -0.48
USP44-202ENST00000393091 RANBP3LQ86VV4 465 aaPredicted RBP12.02□□□□□ -0.48
USP44-202ENST00000393091 ADGRG5Q8IZF4 528 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.48
USP44-202ENST00000393091 NEIL3Q8TAT5 605 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 FAR1Q8WVX9 515 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 FIG4Q92562 907 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 FAM162AQ96A26 154 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 MCUR1Q96AQ8 359 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 CLPTM1LQ96KA5 538 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 TMEM43Q9BTV4 400 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 DSN1Q9H410 356 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 CCM2LQ9NUG4 571 aaPredicted RBP12.02□□□□□ -0.48
USP44-202ENST00000393091 DNPH1O43598 174 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 HCRTR2O43614 444 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 SCO2O43819 266 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 NPIPB7O75200 414 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 HTR2AP28223 471 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PPIAP62937 165 aaKnown RBP12.02□□□□□ -0.49
USP44-202ENST00000393091 KCNJ2P63252 427 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PRAMEF20Q5VT98 475 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PLEKHM3Q6ZWE6 761 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ADGRE4PQ86SQ3 457 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 C10orf67Q8IYJ2 551 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PIK3C3Q8NEB9 887 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 STK35Q8TDR2 534 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 SLC25A43Q8WUT9 341 aaPredicted RBP12.02□□□□□ -0.49
USP44-202ENST00000393091 LIPHQ8WWY8 451 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PROX1Q92786 737 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 SLC38A4Q969I6 547 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ZNF524Q96C55 264 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 HSH2DQ96JZ2 352 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PRRC1Q96M27 445 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 PIGQQ9BRB3 760 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 CARD8Q9Y2G2 431 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ARHGAP21Q5T5U3 1957 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 GTPBP1O00178 669 aaKnown RBP12.02□□□□□ -0.49
USP44-202ENST00000393091 SEMA7AO75326 666 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 TSPAN19P0C672 248 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ITGA2P17301 1181 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 VASNQ6EMK4 673 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 OFCC1Q8IZS5 231 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 OR5M3Q8NGP4 307 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ZNF347Q96SE7 839 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 A4GNTQ9UNA3 340 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ENPP4Q9Y6X5 453 aa12.02□□□□□ -0.49
USP44-202ENST00000393091 ZZEF1O43149 2961 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 LAMA5O15230 3695 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 PNMTP11086 282 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 RHCEP18577 417 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 POLR2HP52434 150 aaKnown RBP12.01□□□□□ -0.49
USP44-202ENST00000393091 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.01□□□□□ -0.49
USP44-202ENST00000393091 FAM156AQ8NDB6 213 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 ST6GALNAC3Q8NDV1 305 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 OR4K17Q8NGC6 315 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 MPP4Q96JB8 637 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 ADGRG7Q96K78 797 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 POTEKPQ9BYX7 375 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 AMBRA1Q9C0C7 1298 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 PIF1Q9H611 641 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 TAS2R10Q9NYW0 307 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 EGFL7Q9UHF1 273 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 ARRDC5A6NEK1 342 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 CLDN24A6NM45 220 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 HOXD4P09016 255 aaPredicted RBP12.01□□□□□ -0.49
USP44-202ENST00000393091 NCK1P16333 377 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 CCNIQ14094 377 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 SLC10A1Q14973 349 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 IFNEQ86WN2 208 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 CARM1Q86X55 608 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 WFDC6Q9BQY6 131 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 FANCFQ9NPI8 374 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 MED11Q9P086 117 aa12.01□□□□□ -0.49
USP44-202ENST00000393091 AP3D1O14617 1153 aa12□□□□□ -0.49
USP44-202ENST00000393091 CHP2O43745 196 aa12□□□□□ -0.49
USP44-202ENST00000393091 PDE5AO76074 875 aa12□□□□□ -0.49
USP44-202ENST00000393091 RAP2AP10114 183 aa12□□□□□ -0.49
USP44-202ENST00000393091 ZNF24P17028 368 aa12□□□□□ -0.49
USP44-202ENST00000393091 DPP4P27487 766 aa12□□□□□ -0.49
USP44-202ENST00000393091 ZNF41P51814 821 aaPredicted RBP12□□□□□ -0.49
USP44-202ENST00000393091 ALDH6A1Q02252 535 aaKnown RBP12□□□□□ -0.49
USP44-202ENST00000393091 CRYZQ08257 329 aaKnown RBP12□□□□□ -0.49
USP44-202ENST00000393091 QPRTQ15274 297 aa12□□□□□ -0.49
USP44-202ENST00000393091 ULK3Q6PHR2 472 aa12□□□□□ -0.49
USP44-202ENST00000393091 FAM180AQ6UWF9 173 aa12□□□□□ -0.49
USP44-202ENST00000393091 LACC1Q8IV20 430 aa12□□□□□ -0.49
USP44-202ENST00000393091 C3orf49Q96BT1 292 aa12□□□□□ -0.49
USP44-202ENST00000393091 NDUFAF4Q9P032 175 aa12□□□□□ -0.49
USP44-202ENST00000393091 THY1P04216 161 aa12□□□□□ -0.49
USP44-202ENST00000393091 ZNF708P17019 499 aa12□□□□□ -0.49
USP44-202ENST00000393091 HK1P19367 917 aa12□□□□□ -0.49
USP44-202ENST00000393091 SLC7A1P30825 629 aa12□□□□□ -0.49
USP44-202ENST00000393091 RAC1P63000 192 aa12□□□□□ -0.49
USP44-202ENST00000393091 SELENBP1Q13228 472 aa12□□□□□ -0.49
USP44-202ENST00000393091 SPPL2CQ8IUH8 684 aa12□□□□□ -0.49
USP44-202ENST00000393091 TEX19Q8NA77 164 aa12□□□□□ -0.49
USP44-202ENST00000393091 SLCO4A1Q96BD0 722 aa12□□□□□ -0.49
USP44-202ENST00000393091 GNRHR2Q96P88 292 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms