RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 FOXK2Q01167 660 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 QSOX2Q6ZRP7 698 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 MEPCEQ7L2J0 689 aaKnown RBP23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 BCORP1Q8N888 145 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 ZNF615Q8N8J6 731 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 ZDHHC12Q96GR4 267 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 ZNF578Q96N58 590 aaPredicted RBP23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 JAM3Q9BX67 310 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 CHRNA10Q9GZZ6 450 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 CAB39Q9Y376 341 aaPredicted RBP23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 OR10H1Q9Y4A9 318 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 MAU2Q9Y6X3 613 aa23.6■■□□□ 1.37
SMARCD3-203ENST00000392811 H0YIG0 161 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 J3QRE1 110 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 HCN1O60741 890 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 MSL3P1P0C860 447 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 CSNK1EP49674 416 aaKnown RBP23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 CRTC2Q53ET0 693 aaPredicted RBP23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 SLC25A46Q96AG3 418 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 SLC30A2Q9BRI3 323 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 RAB33BQ9H082 229 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 PRO3102Q9H379 93 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 CMC2Q9NRP2 79 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 EPHA6Q9UF33 1036 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 RNF215Q9Y6U7 377 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 FAM86C2PA6NEL3 165 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 HYAL3O43820 417 aaPredicted RBP23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 CLPSP04118 112 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 CLEC2LP0C7M8 214 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 RBM34P42696 430 aaKnown RBP23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 FABP5Q01469 135 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 GRM7Q14831 915 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 NDUFAF6Q330K2 333 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 ZNF550Q7Z398 422 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 CADM2Q8N3J6 435 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 OR52N1Q8NH53 320 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 SPRYD4Q8WW59 207 aaPredicted RBP23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 KCTD7Q96MP8 289 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 NEURL2Q9BR09 285 aa23.59■■□□□ 1.37
SMARCD3-203ENST00000392811 ABCA7Q8IZY2 2146 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 RGS5O15539 181 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 PSMD4P55036 377 aaKnown RBP23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 STARD6P59095 220 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 RUNX1T1Q06455 604 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 DBPQ10586 325 aaPredicted RBP23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 PRPF38BQ5VTL8 546 aaKnown RBP23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 KIRREL2Q6UWL6 708 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 OR4C3Q8NH37 302 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 SLC35B4Q969S0 331 aa23.58■■□□□ 1.37
SMARCD3-203ENST00000392811 LOC110117498-PIK3R3F6TDL0 507 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 EPHA4P54764 986 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 ZSWIM7Q19AV6 140 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 FCRLBQ6BAA4 426 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 LINC00114Q6XXX2 140 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 OAFQ86UD1 273 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 GATAD2AQ86YP4 633 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 PTP4A1Q93096 173 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 ZNF229Q9UJW7 825 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 TMEM265A0A087WTH1 108 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 IQCMA0A1B0GVH7 501 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 PIAS2O75928 621 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 PAICSP22234 425 aaKnown RBP23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 SDC2P34741 201 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 ACSM1Q08AH1 577 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 SERTAD2Q14140 314 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 ULK3Q6PHR2 472 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 CD200R1LQ6Q8B3 271 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 ZNF322Q6U7Q0 402 aaPredicted RBP23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 SDR16C5Q8N3Y7 309 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 POC5Q8NA72 575 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 SYT14Q8NB59 555 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC37A3Q8NCC5 494 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 KISS1RQ969F8 398 aaPredicted RBP23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 TNFRSF13CQ96RJ3 184 aa23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 SDHCQ99643 169 aaPredicted RBP23.57■■□□□ 1.36
SMARCD3-203ENST00000392811 AKAP8O43823 692 aaKnown RBP23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 BCKDHBP21953 392 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 GALNSP34059 522 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 OR1D5P58170 312 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 HNRNPA0Q13151 305 aaKnown RBP23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 FHL1Q13642 323 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 KLHL12Q53G59 568 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 ZNF362Q5T0B9 420 aaPredicted RBP23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 CMIPQ8IY22 773 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 ASB15Q8WXK1 588 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 PELOQ9BRX2 385 aaKnown RBP23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 SP140LQ9H930 580 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 LANCL2Q9NS86 450 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 CUTCQ9NTM9 273 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 RPS6KB2Q9UBS0 482 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 SPAG17Q6Q759 2223 aa23.56■■□□□ 1.36
SMARCD3-203ENST00000392811 SERINC4A6NH21 518 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 C17orf105B2RV13 164 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PRR23D1E9PI22 279 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 GNB5O14775 395 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PRKNO60260 465 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 SNX4O95219 450 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PPP1R3DO95685 299 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms