RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 B3GNT2Q9NY97 397 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.21■□□□□ 0.35
SSC5D-201ENST00000389623 TVP23AA6NH52 213 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 OR52A4PA6NMU1 304 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 SRPX2O60687 465 aaPredicted RBP17.21■□□□□ 0.35
SSC5D-201ENST00000389623 SNAPINO95295 136 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 PROS1P07225 676 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 FGL2Q14314 439 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 MFSD13AQ14CX5 517 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 HSF5Q4G112 596 aaPredicted RBP17.21■□□□□ 0.35
SSC5D-201ENST00000389623 HENMT1Q5T8I9 393 aaKnown RBP17.21■□□□□ 0.35
SSC5D-201ENST00000389623 ANKRD34AQ69YU3 496 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 RPL22L1Q6P5R6 122 aaKnown RBP17.21■□□□□ 0.35
SSC5D-201ENST00000389623 BCDIN3DQ7Z5W3 292 aaKnown RBP17.21■□□□□ 0.35
SSC5D-201ENST00000389623 NLRP8Q86W28 1048 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 SVBPQ8N300 66 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 ESX1Q8N693 406 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 LMX1AQ8TE12 382 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 TM9SF4Q92544 642 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 GHSRQ92847 366 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 TMEM38AQ9H6F2 299 aa17.21■□□□□ 0.35
SSC5D-201ENST00000389623 TCRBV5S2A0A599 114 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 C9J4A7 227 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 SMLR1H3BR10 107 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 I6L893 689 aaPredicted RBP17.21■□□□□ 0.34
SSC5D-201ENST00000389623 SYT7O43581 403 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 MPIG6BO95866 241 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 CDK2P24941 298 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 SLC26A5P58743 744 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 MEF2DQ14814 521 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 EOGTQ5NDL2 527 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 CCNJQ5T5M9 372 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 ZNF704Q6ZNC4 412 aaPredicted RBP17.21■□□□□ 0.34
SSC5D-201ENST00000389623 KCNJ16Q9NPI9 418 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 RPS10P5Q9NQ39 176 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 PLCXD1Q9NUJ7 323 aa17.21■□□□□ 0.34
SSC5D-201ENST00000389623 HHLA1C9JL84 531 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 C1QBP02746 253 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 GAAP10253 952 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 PNMTP11086 282 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 LIPCP11150 499 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 PPP3CBP16298 524 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 CCNOP22674 350 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SORDQ00796 357 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 CDC20Q12834 499 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 AQP6Q13520 282 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 LAS2Q8IYD9 372 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 CPXM2Q8N436 756 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 DUSP19Q8WTR2 217 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 EMC7Q9NPA0 242 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 ABI3Q9P2A4 366 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SLC7A11Q9UPY5 501 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 UBE2J1Q9Y385 318 aaPredicted RBP17.2■□□□□ 0.34
SSC5D-201ENST00000389623 HLA-DMAP28067 261 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 RACK1P63244 317 aaKnown RBP17.2■□□□□ 0.34
SSC5D-201ENST00000389623 DCST2Q5T1A1 773 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 GKN2Q86XP6 184 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SYT3Q9BQG1 590 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 CXorf36Q9H7Y0 433 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 ZNF334Q9HCZ1 680 aaPredicted RBP17.2■□□□□ 0.34
SSC5D-201ENST00000389623 CPED1A4D0V7 1026 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SLC9B1P1A6NJY1 282 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 TMX2-CTNND1H3BSU7 103 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 TGM5O43548 720 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 DIRAS3O95661 229 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 POU3F4P49335 361 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 TAS2R19P59542 299 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SNRPGP62308 76 aaKnown RBP17.2■□□□□ 0.34
SSC5D-201ENST00000389623 ASAH1Q13510 395 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 RBMS2Q15434 407 aaKnown RBP17.2■□□□□ 0.34
SSC5D-201ENST00000389623 ZNF454Q8N9F8 522 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 NECTIN4Q96NY8 510 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 INTS14Q96SY0 518 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 ALOXE3Q9BYJ1 711 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SLC2A4RGQ9NR83 387 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 GPR34Q9UPC5 381 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 NUP205Q92621 2012 aa17.2■□□□□ 0.34
SSC5D-201ENST00000389623 SBK3P0C264 359 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 ZNF888P0CJ79 500 aaPredicted RBP17.19■□□□□ 0.34
SSC5D-201ENST00000389623 TIMP2P16035 220 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 SLC2A5P22732 501 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 RPS27AP62979 156 aaKnown RBP17.19■□□□□ 0.34
SSC5D-201ENST00000389623 UBA52P62987 128 aaKnown RBP17.19■□□□□ 0.34
SSC5D-201ENST00000389623 PAQR8Q8TEZ7 354 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 SLC17A9Q9BYT1 436 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 PDE7BQ9NP56 450 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 AKIP1Q9NQ31 210 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 C1GALT1Q9NS00 363 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 HNRNPA1P09651 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
SSC5D-201ENST00000389623 PKLRP30613 574 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 LTBQ06643 244 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 GLB1L2Q8IW92 636 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 BMFQ96LC9 184 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 OR5B12Q96R08 314 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 NEURL2Q9BR09 285 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 TARM1B6A8C7 271 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 SOCS7O14512 581 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 APBB3O95704 486 aa17.19■□□□□ 0.34
SSC5D-201ENST00000389623 IFNA17P01571 189 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms