RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 POU4F2Q12837 409 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 TUBA1AQ71U36 451 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 CCDC80Q76M96 950 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 CNOT9Q92600 299 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 COX14Q96I36 57 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 DSN1Q9H410 356 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF696Q9H7X3 374 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 KLHL21Q9UJP4 597 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 MAGEA8P43361 318 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 CCL7P80098 99 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 SMN1Q16637 294 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 HSD17B12Q53GQ0 312 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 GUSBP11Q6P575 273 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 LRRC69Q6ZNQ3 347 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 RBM45Q8IUH3 476 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 ADGRF3Q8IZF5 1079 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 PMM1Q92871 262 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 INIPQ9NRY2 104 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 SH3BGRL2Q9UJC5 107 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 A0A1B0GWA3 101 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 C7orf72A4D263 438 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 LILRA5A6NI73 299 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 POU3F2P20265 443 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 TRHRP34981 398 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 POU3F1Q03052 451 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 PDE7AQ13946 482 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 MAD2L1BPQ15013 274 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM71Q6P5X7 295 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 RPS19BP1Q86WX3 136 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 SLITRK4Q8IW52 837 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 ESX1Q8N693 406 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 PHOX2BQ99453 314 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 CHRDQ9H2X0 955 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 UCKL1Q9NWZ5 548 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 C19orf53Q9UNZ5 99 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 DNAJB5O75953 348 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC2A2P11168 524 aaPredicted RBP12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CHRNB1P11230 501 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 RAB25P57735 213 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SIRT6Q8N6T7 355 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 TNFAIP8L1Q8WVP5 186 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CNRIP1Q96F85 164 aaPredicted RBP12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CCDC74BQ96LY2 380 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF578Q96N58 590 aaPredicted RBP12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CSF3RQ99062 836 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CDC6Q99741 560 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 A4GALTQ9NPC4 353 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 FCMRO60667 390 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 RAD1O60671 282 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 PLATP00750 562 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 ALPLP05186 524 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CASP6P55212 293 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 GK3PQ14409 553 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 ANKDD1AQ495B1 522 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 QSOX2Q6ZRP7 698 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 PRSS48Q7RTY5 328 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 KIAA0907Q7Z7F0 614 aaPredicted RBP12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC35F3Q8IY50 421 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 GALNT6Q8NCL4 622 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 OR2A14Q96R47 310 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 UTP23Q9BRU9 249 aaKnown RBP12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 METTL21EPA6NDL7 271 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CTSVO60911 334 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CHMP24386 653 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CA13Q8N1Q1 262 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 PJA1Q8NG27 643 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 FUNDC2Q9BWH2 189 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 TWSG1Q9GZX9 223 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 NDUFAF4Q9P032 175 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 FXYD1O00168 92 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC16A7O60669 478 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CD46P15529 392 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 ACTA2P62736 377 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 ACTG2P63267 376 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SPEM2Q0P670 501 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 CBLBQ13191 982 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 RIN1Q13671 783 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 KEAP1Q14145 624 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 TP53I3Q53FA7 332 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 B3GLCTQ6Y288 498 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC35A4Q96G79 324 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 DUSP22Q9NRW4 184 aa12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 BOKQ9UMX3 212 aaPredicted RBP12.17□□□□□ -0.46
PTPRN2-202ENST00000389416 H0YC42 278 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 KIAA0513O60268 411 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 KDM4BO94953 1096 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 IDUAP35475 653 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 DMPKQ09013 629 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SAMD12Q8N8I0 201 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 DTX3Q8N9I9 347 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 B3GNT7Q8NFL0 401 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 OR1J4Q8NGS1 313 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SDF2Q99470 211 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 EBF1Q9UH73 591 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms