RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 GRIP2Q9C0E4 1043 aa15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 GP6Q9HCN6 339 aa15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 TNFRSF12AQ9NP84 129 aa15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 ZCCHC3Q9NUD5 404 aaKnown RBP15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 LPAR3Q9UBY5 353 aa15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 ING1Q9UK53 422 aaPredicted RBP15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 WBP11Q9Y2W2 641 aaKnown RBP15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 GPC6Q9Y625 555 aaPredicted RBP15.7■□□□□ 0.1
PDLIM4-202ENST00000379018 CIB4A0PJX0 185 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 CCT8L1PA6NM43 557 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 M0R1B8 84 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 KIF2AO00139 706 aaPredicted RBP15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 LMX1BO60663 402 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 LY6HO94772 140 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 IFI6P09912 130 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 IGHV4-31P0DP07 118 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 MYL2P10916 166 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 SLC25A16P16260 332 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 PRKCAP17252 672 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 CKAP4Q07065 602 aaKnown RBP15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 SELENBP1Q13228 472 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 CFAP157Q5JU67 520 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 TIMM23BQ5SRD1 257 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 C11orf71Q6IPW1 123 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 B3GLCTQ6Y288 498 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 TRIM46Q7Z4K8 759 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 ZNF527Q8NB42 609 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 C3orf49Q96BT1 292 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 DNAJA3Q96EY1 480 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 DHRS9Q9BPW9 319 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 HEATR1Q9H583 2144 aaKnown RBP15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 REEP4Q9H6H4 257 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 ANKZF1Q9H8Y5 726 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 BCO1Q9HAY6 547 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 BAIAP2L1Q9UHR4 511 aa15.69■□□□□ 0.1
PDLIM4-202ENST00000379018 H3BNH8 94 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 SMAD9O15198 467 aaKnown RBP15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 RGS14O43566 566 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 CYP7B1O75881 506 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 DHRS4L1P0CG22 281 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 IGFBP5P24593 272 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 GCAP28676 217 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 LCN1P31025 176 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 RAC3P60763 192 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 RPL38P63173 70 aaKnown RBP15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 GGTLC2Q14390 218 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 TMEM108Q6UXF1 575 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 TIFABQ6ZNK6 161 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 ZNF572Q7Z3I7 529 aaPredicted RBP15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 GALNT5Q7Z7M9 940 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 GPR119Q8TDV5 335 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 ZNF524Q96C55 264 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 FAM120BQ96EK7 910 aaKnown RBP15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 QRSL1Q9H0R6 528 aaKnown RBP15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 C1orf109Q9NX04 203 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 ICAM5Q9UMF0 924 aa15.68■□□□□ 0.1
PDLIM4-202ENST00000379018 OR5H1A6NKK0 313 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 ELOA3DA6NLF2 546 aaPredicted RBP15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 H6PDO95479 791 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 HMGN2P05204 90 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 SDC1P18827 310 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 TP53BP2Q13625 1128 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 QPRTQ15274 297 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 CARTPTQ16568 116 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 ELOA3BQ3SY89 546 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 KLHL17Q6TDP4 642 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 FRMD7Q6ZUT3 714 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 ZNF433Q8N7K0 673 aaPredicted RBP15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 ELOA3Q8NG57 546 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 C10orf105Q8TEF2 133 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 MRGPRX4Q96LA9 322 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 TSPYL1Q9H0U9 437 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 TMEM160Q9NX00 188 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 KCNS2Q9ULS6 477 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 TRAF6Q9Y4K3 522 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 ATP23Q9Y6H3 246 aa15.67■□□□□ 0.1
PDLIM4-202ENST00000379018 NUP214P35658 2090 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 CYTIPO60759 359 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 COX5AP20674 150 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 USF1P22415 310 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 CD40P25942 277 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 SUMO3P55854 103 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 ETF1P62495 437 aaKnown RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 KIAA0040Q15053 153 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 GALNTL6Q49A17 601 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 ARL13AQ5H913 290 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 DCST2Q5T1A1 773 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 ZCCHC12Q6PEW1 402 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 ZYG11AQ6WRX3 759 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 DEPDC4Q8N2C3 294 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 RADILQ96JH8 1075 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 CCT7Q99832 543 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 SIRT3Q9NTG7 399 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 ACSS1Q9NUB1 689 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 NTMQ9P121 344 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 TBK1Q9UHD2 729 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 MGAT4BQ9UQ53 548 aa15.66■□□□□ 0.1
PDLIM4-202ENST00000379018 CCL27Q9Y4X3 112 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms