RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SCAMP5Q8TAC9 235 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CDKN2AIPNLQ96HQ2 116 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 MEPEQ9NQ76 525 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FBXL3Q9UKT7 428 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 WDR45Q9Y484 360 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 TAF1P21675 1872 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 COL22A1Q8NFW1 1626 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 C5orf52A6NGY3 159 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 A6NLC8 198 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 K7EPK0 472 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 QSOX1O00391 747 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 DLEU1O43261 78 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 PCDH8O95206 1070 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 AK1P00568 194 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 PRPS2P11908 318 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 TACR2P21452 398 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 IFNGR2P38484 337 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 EPHA4P54764 986 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OTUD1Q5VV17 481 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OR2T2Q6IF00 324 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 VHLLQ6RSH7 139 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM71E2Q8N5Q1 922 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FBXO15Q8NCQ5 510 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FIBINQ8TAL6 211 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 APOLD1Q96LR9 279 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF354BQ96LW1 612 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SMOQ99835 787 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 C20orf24Q9BUV8 137 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 RCE1Q9Y256 329 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 GPR45Q9Y5Y3 372 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ELOA3CA0A087WX78 387 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM72CH0Y354 149 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 AQP7O14520 342 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SH3BGRLO75368 114 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF821O75541 412 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SLC25A14O95258 325 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 S1PR4O95977 384 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 LRG1P02750 347 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 IFNW1P05000 195 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OR4Q2P0C623 313 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CTPS1P17812 591 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 PCGF2P35227 344 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CSNK1EP49674 416 aaKnown RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 CACNG1Q06432 222 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SCAPQ12770 1279 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ARHGAP11BQ3KRB8 267 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 TIGD5Q53EQ6 642 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF805Q5CZA5 627 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 TCEAL5Q5H9L2 206 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM72AQ5TYM5 149 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 NSUN5P2Q63ZY6 315 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OR2A2Q6IF42 318 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM72DQ6L9T8 149 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 FAM72BQ86X60 149 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OR13C4Q8NGS5 318 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 OR1S1Q8NH92 325 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 ARNTL2Q8WYA1 636 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 HLA-CQ95604 372 aa11.05□□□□□ -0.64
NPHP4-202ENST00000378161 THOC3Q96J01 351 aaKnown RBP11.05□□□□□ -0.64
NPHP4-202ENST00000378161 hCG_1809904A0A1W2PP81 198 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 A0A1W2PR64 198 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 A0A1W2PRV1 198 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ARL5CA6NH57 179 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 INSIG1O15503 277 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CA12O43570 354 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ECI2O75521 394 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 NCR1O76036 304 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CLDN9O95484 217 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 NFYBP25208 207 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 HTR2CP28335 458 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CCND3P30281 292 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CLDN8P56748 225 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 MBTPS1Q14703 1052 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 UNC50Q53HI1 259 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ARL9Q6T311 187 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 VTCN1Q7Z7D3 282 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 MAML2Q8IZL2 1156 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 RAB39BQ96DA2 213 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 PDLIM5Q96HC4 596 aaKnown RBP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 KATNB1Q9BVA0 655 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ELOVL1Q9BW60 279 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 PRR14Q9BWN1 585 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ACTRT3Q9BYD9 372 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 COMMD4Q9H0A8 199 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 KLHL9Q9P2J3 617 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 DKKL1Q9UK85 242 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF593O00488 134 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-202ENST00000378161 SELENOFO60613 162 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CSN2P05814 226 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CST2P09228 141 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 CD80P33681 288 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 NPBWR1P48145 328 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 RAB1AP62820 205 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 TRIM61Q5EBN2 209 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 OR2W3Q7Z3T1 314 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 PIM3Q86V86 326 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 OR56B2PQ8NGI1 322 aa11.04□□□□□ -0.64
NPHP4-202ENST00000378161 AARSD1Q9BTE6 412 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms