RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 EPXP11678 715 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 SFTPDP35247 375 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 CDKN2CP42773 168 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 MAGEA8P43361 318 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 KIR2DL2P43627 348 aaPredicted RBP15.09■□□□□ 0.01
HMGN4-201ENST00000377575 PCYT1AP49585 367 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 STX1BP61266 288 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 QPRTQ15274 297 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 GUSBP1Q15486 140 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 EPGNQ6UW88 154 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 DNAJC14Q6Y2X3 702 aaPredicted RBP15.09■□□□□ 0.01
HMGN4-201ENST00000377575 FRRS1Q6ZNA5 592 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 FAM214BQ7L5A3 538 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 GMPPAQ96IJ6 420 aaPredicted RBP15.09■□□□□ 0.01
HMGN4-201ENST00000377575 POLDIP3Q9BY77 421 aaKnown RBP15.09■□□□□ 0.01
HMGN4-201ENST00000377575 SAP130Q9H0E3 1048 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 CLEC4MQ9H2X3 399 aaPredicted RBP15.09■□□□□ 0.01
HMGN4-201ENST00000377575 GLRX2Q9NS18 164 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 KCNE5Q9UJ90 142 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 PROCRQ9UNN8 238 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 CCDC168Q8NDH2 2452 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 A0A0J9YW62 118 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 CENPVL1A0A0U1RR11 272 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 H6PDO95479 791 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 ANP32DO95626 131 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 GSNP06396 782 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 PABPC4LP0CB38 370 aaKnown RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 UBTFL6P0CB48 400 aaPredicted RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 CD8BP10966 210 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 H2AFXP16104 143 aaPredicted RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 PGCP20142 388 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 IL11P20809 199 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 POLR2JP52435 117 aaKnown RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 CTBP2P56545 445 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 DAZAP2Q15038 168 aaPredicted RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 TOMM34Q15785 309 aaPredicted RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 SLC25A53Q5H9E4 307 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 FBXW10Q5XX13 1052 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 OLIG3Q7RTU3 272 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 BTLAQ7Z6A9 289 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 FAM71CQ8NEG0 241 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 OR6K3Q8NGY3 331 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 LINC01560Q8TB33 94 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 ZFP90Q8TF47 636 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 TMEM234Q8WY98 164 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 ST8SIA1Q92185 356 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 CPNE4Q96A23 557 aaPredicted RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 REXO5Q96IC2 774 aaKnown RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 ITCHQ96J02 903 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 DACH2Q96NX9 599 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 TRNT1Q96Q11 434 aaKnown RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 SLC39A3Q9BRY0 314 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 THUMPD3Q9BV44 507 aaKnown RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 TCF7L2Q9NQB0 619 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 RASSF1Q9NS23 344 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 INTS9Q9NV88 658 aaKnown RBP15.08■□□□□ 0
HMGN4-201ENST00000377575 AKAP9Q99996 3911 aa15.08■□□□□ 0
HMGN4-201ENST00000377575 FAM234BA2RU67 622 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 SH3D21A4FU49 640 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 ETV2O00321 342 aaPredicted RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 SS18L1O75177 396 aaPredicted RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 NTN1O95631 604 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 POU2F1P14859 743 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 SLC7A1P30825 629 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 CD79BP40259 229 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 SLC6A8P48029 635 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 CARD18P57730 90 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 PPP2R2AP63151 447 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 MAPK14Q16539 360 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 ZNF239Q16600 458 aaKnown RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 TIGD2Q4W5G0 525 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 AP1ARQ63HQ0 302 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 GTF2IRD2BQ6EKJ0 949 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 C3orf33Q6P1S2 294 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 GTF2IRD2Q86UP8 949 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 PNPT1Q8TCS8 783 aaKnown RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 OSTF1Q92882 214 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 OPN3Q9H1Y3 402 aaPredicted RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 SLCO1B3Q9NPD5 702 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 ELOVL5Q9NYP7 299 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 P2RX2Q9UBL9 471 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 NDRG3Q9UGV2 375 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 ITGB1BP2Q9UKP3 347 aa15.07■□□□□ 0
HMGN4-201ENST00000377575 HRNRQ86YZ3 2850 aaPredicted RBP15.07■□□□□ 0
HMGN4-201ENST00000377575 FAM221AA4D161 298 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 DNAJA2O60884 412 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 CGAP01215 116 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 ZCCHC18P0CG32 403 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 NR2F1P10589 423 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 SHC1P29353 583 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 PGM1P36871 562 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 KCNJ5P48544 419 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 MRPL19P49406 292 aaKnown RBP15.06■□□□□ 0
HMGN4-201ENST00000377575 CHRNEQ04844 493 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 GNA13Q14344 377 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 SYPL1Q16563 259 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 TMEM176BQ3YBM2 270 aaPredicted RBP15.06■□□□□ 0
HMGN4-201ENST00000377575 C6orf10Q5SRN2 563 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 LRRC74BQ6ZQY2 392 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms