RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CLDN16Q9Y5I7 305 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 SPAG17Q6Q759 2223 aa18.66■□□□□ 0.58
VSX1-202ENST00000376709 RHPN2P1A8MT19 583 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 LMO7DNF2Z398 122 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 LRRTM2O43300 516 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 AKAP8O43823 692 aaKnown RBP18.65■□□□□ 0.58
VSX1-202ENST00000376709 HCN1O60741 890 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 RFPL3O75679 317 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 TGM4P49221 684 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 AGAP7PQ5VUJ5 663 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 ZNF578Q96N58 590 aaPredicted RBP18.65■□□□□ 0.58
VSX1-202ENST00000376709 SPRTNQ9H040 489 aaPredicted RBP18.65■□□□□ 0.58
VSX1-202ENST00000376709 SF3B6Q9Y3B4 125 aaKnown RBP18.65■□□□□ 0.58
VSX1-202ENST00000376709 TMEM184BQ9Y519 407 aaPredicted RBP18.65■□□□□ 0.58
VSX1-202ENST00000376709 MYO15AQ9UKN7 3530 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 ABCA7Q8IZY2 2146 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 BCKDHBP21953 392 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 FOXK2Q01167 660 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 FGFBP1Q14512 234 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 KLHL12Q53G59 568 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
VSX1-202ENST00000376709 QSOX2Q6ZRP7 698 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 ZNF550Q7Z398 422 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 OAFQ86UD1 273 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 ZDHHC12Q96GR4 267 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 SP140LQ9H930 580 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 TBC1D17Q9HA65 648 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 RPS6KB2Q9UBS0 482 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 GSTK1Q9Y2Q3 226 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 MAU2Q9Y6X3 613 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 PCDH15Q96QU1 1955 aa18.65■□□□□ 0.58
VSX1-202ENST00000376709 LALBAP00709 142 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 CT45A8P0DMV1 189 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 CT45A9P0DMV2 189 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 FOSL2P15408 326 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 CD1CP29017 333 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 NXPH1P58417 271 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 HNRNPA0Q13151 305 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 ZNF141Q15928 474 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 C14orf28Q4W4Y0 310 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 CT45A2Q5DJT8 189 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 MEPCEQ7L2J0 689 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 C17orf82Q86X59 251 aaPredicted RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 SPEM1Q8N4L4 309 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 LSMEM1Q8N8F7 131 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 OR52N1Q8NH53 320 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 PCED1AQ9H1Q7 454 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 CMC2Q9NRP2 79 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 IQCMA0A1B0GVH7 501 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 A0A1W2PPC1 479 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 ZC3H12DA2A288 527 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 PRR23D1E9PI22 279 aaPredicted RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 PRR23D2P0DMB1 279 aaPredicted RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 CELP19835 753 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 SDC2P34741 201 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 RBM34P42696 430 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 CSNK1EP49674 416 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 SLC16A1P53985 500 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 ATP12AP54707 1039 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 PSMD4P55036 377 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 RPS7P62081 194 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 FABP5Q01469 135 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 FUT7Q11130 342 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 KCNAB1Q14722 419 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 GRM7Q14831 915 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 FCRLBQ6BAA4 426 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 BCORP1Q8N888 145 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 OR4C6Q8NH72 309 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 SPRYD4Q8WW59 207 aaPredicted RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 AHCYL2Q96HN2 611 aaKnown RBP18.64■□□□□ 0.57
VSX1-202ENST00000376709 YIPF2Q9BWQ6 316 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 UCKL1Q9NWZ5 548 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 LRIT1Q9P2V4 623 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 EPHA6Q9UF33 1036 aa18.64■□□□□ 0.57
VSX1-202ENST00000376709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.63■□□□□ 0.57
VSX1-202ENST00000376709 RIIAD1A6NNX1 92 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 H0YIG0 161 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 MSL3P1P0C860 447 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 NOS3P29474 1203 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 COPZ1P61923 177 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 CRYZQ08257 329 aaKnown RBP18.63■□□□□ 0.57
VSX1-202ENST00000376709 ZSWIM7Q19AV6 140 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 ULK3Q6PHR2 472 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 LAX1Q8IWV1 398 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 ZNF649Q9BS31 505 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 ZNF426Q9BUY5 554 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 TMED9Q9BVK6 235 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 HCAR1Q9BXC0 346 aa18.63■□□□□ 0.57
VSX1-202ENST00000376709 C12orf71A8MTZ7 269 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 GNB5O14775 395 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 DLGAP3O95886 979 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 CSTAP01040 98 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 NGFRP08138 427 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 CLEC2LP0C7M8 214 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SLC9A3P48764 834 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 SERTAD2Q14140 314 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 ZNF322Q6U7Q0 402 aaPredicted RBP18.62■□□□□ 0.57
VSX1-202ENST00000376709 TMPRSS11AQ6ZMR5 421 aa18.62■□□□□ 0.57
VSX1-202ENST00000376709 ACBD7Q8N6N7 88 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms