RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ZNF704Q6ZNC4 412 aaPredicted RBP18.76■□□□□ 0.59
VSX1-201ENST00000376707 PLEKHM3Q6ZWE6 761 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 YTHDF3Q7Z739 585 aaKnown RBP18.76■□□□□ 0.59
VSX1-201ENST00000376707 TOR1AIP2Q8NFQ8 470 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 OR8J2Q8NGG1 315 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 MRGPRX4Q96LA9 322 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 PPP1R36Q96LQ0 422 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 Q96MF0 132 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 SDF2Q99470 211 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 OR10A4Q9H209 315 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 KLHL13Q9P2N7 655 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 NIPBLQ6KC79 2804 aaeCLIP18.76■□□□□ 0.59
VSX1-201ENST00000376707 DUXAA6NLW8 204 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 RNASET2O00584 256 aaKnown RBP18.75■□□□□ 0.59
VSX1-201ENST00000376707 ZNF264O43296 627 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 EIF4E2O60573 245 aaKnown RBP18.75■□□□□ 0.59
VSX1-201ENST00000376707 PRKD3O94806 890 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 UBL4AP11441 157 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 SLC7A1P30825 629 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 RPS26P62854 115 aaKnown RBP18.75■□□□□ 0.59
VSX1-201ENST00000376707 ALKBH2Q6NS38 261 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 FCRLAQ7L513 359 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 STEAP2Q8NFT2 490 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 OR5W2Q8NH69 310 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 ZFP90Q8TF47 636 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 PLPPR2Q96GM1 343 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 KCNK9Q9NPC2 374 aa18.75■□□□□ 0.59
VSX1-201ENST00000376707 H7C1Q1 480 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 ANKRD28O15084 1053 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 AK1P00568 194 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 NID1P14543 1247 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 MATN1P21941 496 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 SELENBP1Q13228 472 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 STX3Q13277 289 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 CBFBQ13951 182 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 GPR68Q15743 365 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 PDZK1Q5T2W1 519 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 OR4F3Q6IEY1 312 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 NUFIP2Q7Z417 695 aaKnown RBP18.74■□□□□ 0.59
VSX1-201ENST00000376707 C6orf120Q7Z4R8 191 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 TUSC5Q8IXB3 177 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 CLECL1Q8IZS7 167 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 ARL8AQ96BM9 186 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 ARSGQ96EG1 525 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 COX4I2Q96KJ9 171 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 SLC35G5Q96KT7 338 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 TACO1Q9BSH4 297 aaKnown RBP18.74■□□□□ 0.59
VSX1-201ENST00000376707 BDH2Q9BUT1 245 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 HDHD5Q9BXW7 423 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 NMUR2Q9GZQ4 415 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 COQ10BQ9H8M1 238 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 GP6Q9HCN6 339 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 PCDHGB4Q9UN71 923 aa18.74■□□□□ 0.59
VSX1-201ENST00000376707 RNF103-CHMP3A0A140T963 221 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 SERINC4A6NH21 518 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 SCN2BO60939 215 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 CYP7B1O75881 506 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 HEXAP06865 529 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 YES1P07947 543 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 BST1Q10588 318 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 QPRTQ15274 297 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 SLC25A53Q5H9E4 307 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 TFAP2EQ6VUC0 442 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 CLEC4FQ8N1N0 589 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 SLC43A2Q8N370 569 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 TMEM171Q8WVE6 324 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 TESCQ96BS2 214 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 S100PBPQ96BU1 408 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 NUF2Q9BZD4 464 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 GSX2Q9BZM3 304 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 DPY30Q9C005 99 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 SERHL2Q9H4I8 314 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 MEAF6Q9HAF1 191 aa18.73■□□□□ 0.59
VSX1-201ENST00000376707 STX11O75558 287 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 NTN1O95631 604 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 PLAUP00749 431 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 LBPP18428 481 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 IL32P24001 234 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 PTH2RP49190 550 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 RAC3P60763 192 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 OGFOD2Q6N063 350 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 C16orf62Q7Z3J2 963 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 GABRG1Q8N1C3 465 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 CIARTQ8N365 385 aaPredicted RBP18.72■□□□□ 0.59
VSX1-201ENST00000376707 OR4A15Q8NGL6 344 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 MIPOL1Q8TD10 442 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 EXD2Q9NVH0 621 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 PNPOQ9NVS9 261 aa18.72■□□□□ 0.59
VSX1-201ENST00000376707 IGHV3-15A0A0B4J1V0 119 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 PRSS51A0A1B0GVH4 220 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 A0A1W2PNR3 127 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 HS3ST1O14792 307 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 SMAD7O15105 426 aaKnown RBP18.71■□□□□ 0.59
VSX1-201ENST00000376707 FCMRO60667 390 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 GCM2O75603 506 aaPredicted RBP18.71■□□□□ 0.59
VSX1-201ENST00000376707 CSTAP01040 98 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 ENPP1P22413 925 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 SLC18A1P54219 525 aa18.71■□□□□ 0.59
VSX1-201ENST00000376707 WDR4P57081 412 aaKnown RBP18.71■□□□□ 0.59
VSX1-201ENST00000376707 PHC1P78364 1004 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms