RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 MKS1Q9NXB0 559 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 ZNF264O43296 627 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 AK1P00568 194 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 SHBGP04278 402 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 SOD3P08294 240 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 EFNA1P20827 205 aaPredicted RBP20.59■□□□□ 0.89
C9orf47-202ENST00000375850 KRTAP1-1Q07627 177 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 CBFBQ13951 182 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 UGT3A2Q3SY77 523 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 ATP6AP1LQ52LC2 224 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 C3orf33Q6P1S2 294 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 OR7A2PQ8NGA2 310 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 MUCL1Q96DR8 90 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 RADILQ96JH8 1075 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 PSD2Q9BQI7 771 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 C12orf65Q9H3J6 166 aaKnown RBP20.59■□□□□ 0.89
C9orf47-202ENST00000375850 ALG2Q9H553 416 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 GPATCH2Q9NW75 528 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 ADAM21Q9UKJ8 722 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 LIPT1Q9Y234 373 aa20.59■□□□□ 0.89
C9orf47-202ENST00000375850 DUXAA6NLW8 204 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 ZNF724A8MTY0 619 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 RNF223E7ERA6 249 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 PIP5K1BO14986 540 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 THBS1P07996 1170 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 LAMP1P11279 417 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 UBL4AP11441 157 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 PRPS1L1P21108 318 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 ENPP1P22413 925 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 SERPINB5P36952 375 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 BSPH1Q075Z2 132 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 XKR7Q5GH72 579 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.58■□□□□ 0.89
C9orf47-202ENST00000375850 C4orf33Q8N1A6 199 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 OIT3Q8WWZ8 545 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 ST8SIA1Q92185 356 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 COQ8BQ96D53 544 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 TRIM2Q9C040 744 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 BHLHE41Q9C0J9 482 aaPredicted RBP20.58■□□□□ 0.89
C9orf47-202ENST00000375850 NMUR2Q9GZQ4 415 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 SLCO5A1Q9H2Y9 848 aa20.58■□□□□ 0.89
C9orf47-202ENST00000375850 MAGED1Q9Y5V3 778 aaPredicted RBP20.58■□□□□ 0.89
C9orf47-202ENST00000375850 FBN3Q75N90 2809 aa20.58■□□□□ 0.88
C9orf47-202ENST00000375850 ZNF814B7Z6K7 855 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 OIP5O43482 229 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 CYTIPO60759 359 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 RASGEF1BQ0VAM2 473 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 PPA1Q15181 289 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 TSC22D1Q15714 1073 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 TOMM34Q15785 309 aaPredicted RBP20.57■□□□□ 0.88
C9orf47-202ENST00000375850 NRF1Q16656 503 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 ARL13AQ5H913 290 aaPredicted RBP20.57■□□□□ 0.88
C9orf47-202ENST00000375850 TIMM23BQ5SRD1 257 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 ZNF614Q8N883 585 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 TMEM234Q8WY98 164 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.57■□□□□ 0.88
C9orf47-202ENST00000375850 APOPT1Q96IL0 206 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 HS6ST2Q96MM7 605 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 CXorf36Q9H7Y0 433 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 SERINC1Q9NRX5 453 aa20.57■□□□□ 0.88
C9orf47-202ENST00000375850 SMIM23A6NLE4 172 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 C6orf47O95873 294 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 CHRNGP07510 517 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 CSNK2A1P68400 391 aaPredicted RBP20.56■□□□□ 0.88
C9orf47-202ENST00000375850 QPRTQ15274 297 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 PGGHGQ32M88 737 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 SEZ6L2Q6UXD5 910 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 GALNT5Q7Z7M9 940 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 DTX2Q86UW9 622 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 ZNF619Q8N2I2 560 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 TMCO5AQ8N6Q1 288 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 ATP6V1C2Q8NEY4 427 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 KBTBD8Q8NFY9 601 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 SLC25A43Q8WUT9 341 aaPredicted RBP20.56■□□□□ 0.88
C9orf47-202ENST00000375850 TRAF4Q9BUZ4 470 aaPredicted RBP20.56■□□□□ 0.88
C9orf47-202ENST00000375850 EMC3Q9P0I2 261 aa20.56■□□□□ 0.88
C9orf47-202ENST00000375850 NPIPA5A0A0B4J1W7 369 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 DPRXA6NFQ7 191 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 SERINC4A6NH21 518 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 NPIPA7E9PJI5 369 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 CD5LO43866 347 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 DNAJA2O60884 412 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 PEX11AO75192 247 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 IFNA2P01563 188 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 NPIPA8P0DM63 369 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 COX5AP20674 150 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 CCR4P51679 360 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 MAD2L1Q13257 205 aaPredicted RBP20.55■□□□□ 0.88
C9orf47-202ENST00000375850 PTGR1Q14914 329 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 PDK3Q15120 406 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 DNM1P46Q6ZS02 220 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 RIBC1Q8N443 379 aaPredicted RBP20.55■□□□□ 0.88
C9orf47-202ENST00000375850 FNDC5Q8NAU1 212 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 EPS8L3Q8TE67 593 aaKnown RBP20.55■□□□□ 0.88
C9orf47-202ENST00000375850 OR7D2Q96RA2 312 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 SDF2Q99470 211 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 LAT2Q9GZY6 243 aa20.55■□□□□ 0.88
C9orf47-202ENST00000375850 CISD1Q9NZ45 108 aaKnown RBP20.55■□□□□ 0.88
C9orf47-202ENST00000375850 ING1Q9UK53 422 aaPredicted RBP20.55■□□□□ 0.88
C9orf47-202ENST00000375850 GOLGA8QA0A0J9YX86 632 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms