RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 NPFFR2Q9Y5X5 522 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 HMGN4O00479 90 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 ADAM12O43184 909 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 STC2O76061 302 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 SERPIND1P05546 499 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 KLK1P06870 262 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 IL3P08700 152 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 SMIM6P0DI80 62 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 SAGP10523 405 aaPredicted RBP19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 CENPAP49450 140 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 UBE2IP63279 158 aaKnown RBP19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 PRR5P85299 388 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 RBMS2Q15434 407 aaKnown RBP19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 CCSMST1Q4G0I0 132 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 DCAF12L2Q5VW00 463 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 CXXC5Q7LFL8 322 aaKnown RBP19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 PXKQ7Z7A4 578 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 TBC1D19Q8N5T2 526 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 ACBD7Q8N6N7 88 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 TRIM36Q9NQ86 728 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 H2AFY2Q9P0M6 372 aaPredicted RBP19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 KLHL42Q9P2K6 505 aa19.14■□□□□ 0.65
TMEFF1-201ENST00000374879 ZNF840PA6NDX5 716 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 SNRPGP15A8MWD9 76 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 B4GALT2O60909 372 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 ITGA10O75578 1167 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 MPC1LP0DKB6 136 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 EPXP11678 715 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 ADCYAP1P18509 176 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 XPAP23025 273 aaPredicted RBP19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 CTSOP43234 321 aaPredicted RBP19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 ACSM3Q53FZ2 586 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 DHRS7BQ6IAN0 325 aaPredicted RBP19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 MOB3CQ70IA8 216 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 LRRTM4Q86VH4 590 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 CPOQ8IVL8 374 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 CMTM4Q8IZR5 234 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 NEURL3Q96EH8 262 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 SCLYQ96I15 445 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 CASD1Q96PB1 797 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 OR10H1Q9Y4A9 318 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 TMEM218A2RU14 115 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 PRAMEF27A3QJZ7 478 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 KHDRBS3O75525 346 aaKnown RBP19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 EPPINO95925 133 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 CBR1P16152 277 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 NOS3P29474 1203 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 AVPI1Q5T686 147 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 AGTRAPQ6RW13 159 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 RPTNQ6XPR3 784 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 RFLNAQ6ZTI6 216 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 EDARADDQ8WWZ3 215 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 HINT3Q9NQE9 182 aaKnown RBP19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 ABRACLQ9P1F3 81 aa19.13■□□□□ 0.65
TMEFF1-201ENST00000374879 NAP1L6A6NFF2 107 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 H7C4K7 107 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 K7ERQ8 282 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 S100A9P06702 114 aaKnown RBP19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 GP1BAP07359 652 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 VSIG10L2P0DP72 767 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 CD96P40200 585 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 STARP49675 285 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 ZNF805Q5CZA5 627 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 CHST9Q7L1S5 443 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 SLC44A3Q8N4M1 653 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 RXFP4Q8TDU9 374 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 ENKD1Q9H0I2 346 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 PRDM9Q9NQV7 894 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 C14orf105Q9NVL8 296 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 SLC22A7Q9Y694 548 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 TMEM200CA6NKL6 621 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 F5H5P2 479 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 SULT1C2O00338 296 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 SCAMP1O15126 338 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 SLC16A5O15375 505 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 GATCO43716 136 aaKnown RBP19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 IL5P05113 134 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 TSPAN31Q12999 210 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 CSRP2Q16527 193 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 ADGRF1Q5T601 910 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 ZDHHC20Q5W0Z9 365 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 BAIAP2L2Q6UXY1 529 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 FBXO22Q8NEZ5 403 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 C2orf15Q8WU43 125 aaKnown RBP19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 WBP2Q969T9 261 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 PLEKHA1Q9HB21 404 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 MYNNQ9NPC7 610 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 MIEF1Q9NQG6 463 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 MIOXQ9UGB7 285 aa19.12■□□□□ 0.65
TMEFF1-201ENST00000374879 MEX3AA1L020 520 aaKnown RBP19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 PMS2P1A4D2B8 440 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 CACNB4O00305 520 aaPredicted RBP19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 GOSR2O14653 212 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 PLPP2O43688 288 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 EIF4E2O60573 245 aaKnown RBP19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 FMO6PO60774 539 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 ATP1B1P05026 303 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 SORDQ00796 357 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 CAP1Q01518 475 aa19.11■□□□□ 0.65
TMEFF1-201ENST00000374879 MAPK14Q16539 360 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms