RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 HS6ST2Q96MM7 605 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 ANKZF1Q9H8Y5 726 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
CXCL12-202ENST00000374426 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 PRSS50Q9UI38 385 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 TMED5Q9Y3A6 229 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 KCNE3Q9Y6H6 103 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 NUP214P35658 2090 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-202ENST00000374426 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.21□□□□□ -0.46
CXCL12-202ENST00000374426 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 NPIPB9F8W1W9 429 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 H3BNH8 94 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-202ENST00000374426 SLC7A1P30825 629 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 CRHR1P34998 444 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ASMTP46597 345 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 CCT5P48643 541 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 C21orf58P58505 322 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 SELENBP1Q13228 472 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 PPA1Q15181 289 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 STK11Q15831 433 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 GALNTL6Q49A17 601 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 DCST2Q5T1A1 773 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 R3HCC1LQ7Z5L2 792 aaKnown RBP12.2□□□□□ -0.46
CXCL12-202ENST00000374426 CCDC63Q8NA47 563 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 OR7A2PQ8NGA2 310 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 PSMA8Q8TAA3 256 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF75CPQ92670 426 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-202ENST00000374426 GATA5Q9BWX5 397 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ACTRT3Q9BYD9 372 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 HOXD1Q9GZZ0 328 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ALG2Q9H553 416 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 BARX1Q9HBU1 254 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-202ENST00000374426 GPATCH2Q9NW75 528 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ATP6V1HQ9UI12 483 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 ANK2Q01484 3957 aa12.2□□□□□ -0.46
CXCL12-202ENST00000374426 A0A096LNT2 108 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 ESPNB1AK53 854 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 TMEM233B4DJY2 109 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 C9JVG2 144 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 GTPBP1O00178 669 aaKnown RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 SCAMP2O15127 329 aaKnown RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 SMAD9O15198 467 aaKnown RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 GPRIN2O60269 458 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 CYTIPO60759 359 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 H6PDO95479 791 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 IFNA2P01563 188 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 FESP07332 822 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 LAMP1P11279 417 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 COX5AP20674 150 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 PTNP21246 168 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 HPCAL1P37235 193 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 CCT3P49368 545 aaKnown RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 ATP12AP54707 1039 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 CDH11P55287 796 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 RASGEF1BQ0VAM2 473 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 TP53BP2Q13625 1128 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 UGT3A2Q3SY77 523 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 C10orf107Q8IVU9 208 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 OR5W2Q8NH69 310 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 ADAMTS15Q8TE58 950 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF775Q96BV0 537 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF300Q96RE9 604 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-202ENST00000374426 TRMOQ9BU70 441 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 FAIMQ9NVQ4 179 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 GIMAP2Q9UG22 337 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 B3GALT5Q9Y2C3 310 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 DTNAQ9Y4J8 743 aa12.19□□□□□ -0.46
CXCL12-202ENST00000374426 IGHV4-30-2A0A087WSY4 118 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 A8MV72 311 aaPredicted RBP12.18□□□□□ -0.46
CXCL12-202ENST00000374426 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 ABCD4O14678 606 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 SSX4O60224 188 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 CHEK2O96017 543 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 SHBGP04278 402 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 IGHV1-2P23083 117 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 PCLAFQ15004 111 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 QPRTQ15274 297 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 CHRFAM7AQ494W8 412 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 DDIASQ8IXT1 998 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 TMCO5AQ8N6Q1 288 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 ZNF614Q8N883 585 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 OR56A1Q8NGH5 318 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 RFWD2Q8NHY2 731 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 TWIST2Q8WVJ9 160 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 OR5P2Q8WZ92 322 aa12.18□□□□□ -0.46
CXCL12-202ENST00000374426 MUCL1Q96DR8 90 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms