RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 HIF1ANQ9NWT6 349 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 KLHL42Q9P2K6 505 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 NME7Q9Y5B8 376 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 MROH6A6NGR9 719 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 TPPPO94811 219 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 SCAF4O95104 1147 aaKnown RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 CAPNS1P04632 268 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 HMGN2P05204 90 aaKnown RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 GNB3P16520 340 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 SDC1P18827 310 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 RGS6P49758 472 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 TAS2R19P59542 299 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 MPEG1Q2M385 716 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 PKDCCQ504Y2 493 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 EXOSC6Q5RKV6 272 aaKnown RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 PIP5KL1Q5T9C9 394 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 LYSMD4Q5XG99 296 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 MEPCEQ7L2J0 689 aaKnown RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 ZNF808Q8N4W9 903 aaPredicted RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 PTERQ96BW5 349 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 MICU1Q9BPX6 476 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 NMNAT2Q9BZQ4 307 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 OR51E2Q9H255 320 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 IGKV6-21A0A0C4DH24 114 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 RPS17P08708 135 aaKnown RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 ZNF44P15621 663 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 HOXC13P31276 330 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 TSFMP43897 325 aaKnown RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 GPR176Q14439 515 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 SLC14A2Q15849 920 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 C3orf38Q5JPI3 329 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 FAM180BQ6P0A1 224 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 MOB3CQ70IA8 216 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 B3GNT7Q8NFL0 401 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 OR6T1Q8NGN1 323 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 TMEM163Q8TC26 289 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 NEIL2Q969S2 332 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 EGLN3Q9H6Z9 239 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 PLCXD1Q9NUJ7 323 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 VSX1Q9NZR4 365 aaPredicted RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 ZNF443Q9Y2A4 671 aaPredicted RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 IL13RA1P78552 427 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 METAP1DQ6UB28 335 aaPredicted RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 ZNF765Q7L2R6 523 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
VCL-202ENST00000372755 NTMT1Q9BV86 223 aa10.83□□□□□ -0.68
VCL-202ENST00000372755 A6NL46 340 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 KCNK5O95279 499 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 TIMP1P01033 207 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 PSMB10P40306 273 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 MGAT3Q09327 533 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 FAM83HQ6ZRV2 1179 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 C12orf45Q8N5I9 185 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 FAM160A2Q8N612 972 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 TMEM185AQ8NFB2 350 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 UBXN10Q96LJ8 280 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 DDX31Q9H8H2 851 aaKnown RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 OBP2BQ9NPH6 170 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ARNTLO00327 626 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 TOR1AO14656 332 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 STK17BO94768 372 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 NFYAP23511 347 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 C14orf28Q4W4Y0 310 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ESCO2Q56NI9 601 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 OPN5Q6U736 354 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ZNF322Q6U7Q0 402 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 CPXM2Q8N436 756 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 OR7G1Q8NGA0 311 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 OR6C2Q9NZP2 312 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 TRBV11-1A0A0K0K1C0 115 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 CLN5O75503 358 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ZFAND5O76080 213 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 TAS2R46P59540 309 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 WDR5P61964 334 aaKnown RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 HNRNPA1L2Q32P51 320 aaKnown RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 RTL10Q7L3V2 364 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 NOXA1Q86UR1 476 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 IL1F10Q8WWZ1 152 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 HAS2Q92819 552 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 GORASP2Q9H8Y8 452 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 CD300AQ9UGN4 299 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 BOKQ9UMX3 212 aaPredicted RBP10.82□□□□□ -0.68
VCL-202ENST00000372755 OR52A4PA6NMU1 304 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 H3BMQ9 156 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 PTGESO14684 152 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 KITLGP21583 273 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 IRF4Q15306 451 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ZNF585AQ6P3V2 769 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 KCNIP4Q6PIL6 250 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 OR6F1Q8NGZ6 308 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 ITFG2Q969R8 447 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 DTD2Q96FN9 168 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 C4orf36Q96KX1 117 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 SLC30A3Q99726 388 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 TIMM29Q9BSF4 260 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 METTL9Q9H1A3 318 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 MMP28Q9H239 520 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 OR52D1Q9H346 318 aa10.82□□□□□ -0.68
VCL-202ENST00000372755 NPIPA5A0A0B4J1W7 369 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms