RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 VMP1Q96GC9 406 aa23■■□□□ 1.27
CTSA-203ENST00000372459 SAMD8Q96LT4 415 aa23■■□□□ 1.27
CTSA-203ENST00000372459 MED17Q9NVC6 651 aa23■■□□□ 1.27
CTSA-203ENST00000372459 TAS2R16Q9NYV7 291 aa23■■□□□ 1.27
CTSA-203ENST00000372459 TMEM221A6NGB7 291 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 M0R296 226 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 SURF4O15260 269 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 PRODHO43272 600 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 SCRG1O75711 98 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 SYPP08247 313 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 ADRA2AP08913 450 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 OCM2P0CE71 109 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 OCMP0CE72 109 aaPredicted RBP22.99■■□□□ 1.27
CTSA-203ENST00000372459 HLA-DQA1Q5Y7H0 255 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 RPL13AP3Q6NVV1 102 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 CADM2Q8N3J6 435 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 FANK1Q8TC84 345 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 STT3BQ8TCJ2 826 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 SH3YL1Q96HL8 342 aaPredicted RBP22.99■■□□□ 1.27
CTSA-203ENST00000372459 GAL3ST4Q96RP7 486 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 ZNF426Q9BUY5 554 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 WDR12Q9GZL7 423 aaKnown RBP22.99■■□□□ 1.27
CTSA-203ENST00000372459 OR52D1Q9H346 318 aa22.99■■□□□ 1.27
CTSA-203ENST00000372459 IGLV3-12A0A075B6K2 115 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 CLDN25C9JDP6 229 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 AGRPO00253 132 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 HMGN1P05114 100 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 ADH7P40394 386 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 OPRL1P41146 370 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 DUSP3P51452 185 aaPredicted RBP22.98■■□□□ 1.27
CTSA-203ENST00000372459 EBPQ15125 230 aaKnown RBP22.98■■□□□ 1.27
CTSA-203ENST00000372459 CLPPQ16740 277 aaPredicted RBP22.98■■□□□ 1.27
CTSA-203ENST00000372459 RGS21Q2M5E4 152 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 ZBTB46Q86UZ6 589 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 OR52L1Q8NGH7 329 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 OR1N1Q8NGS0 311 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 SNRNP27Q8WVK2 155 aaKnown RBP22.98■■□□□ 1.27
CTSA-203ENST00000372459 RNF31Q96EP0 1072 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 HMG20AQ9NP66 347 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 GPR52Q9Y2T5 361 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 SCDO00767 359 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 RCBTB2O95199 551 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 BMP7P18075 431 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 COPZ1P61923 177 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 NDUFAF6Q330K2 333 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 RNLSQ5VYX0 342 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 PWWP2BQ6NUJ5 590 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 IGFN1Q86VF2 1251 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 ANKK1Q8NFD2 765 aa22.98■■□□□ 1.27
CTSA-203ENST00000372459 MEPEQ9NQ76 525 aaPredicted RBP22.98■■□□□ 1.27
CTSA-203ENST00000372459 UTS2O95399 124 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 TIAF1O95411 115 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 CH25HO95992 272 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 ZGLP1P0C6A0 271 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 SAGP10523 405 aaPredicted RBP22.97■■□□□ 1.27
CTSA-203ENST00000372459 MED22Q15528 200 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 TMEM44Q2T9K0 475 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 NKAIN1Q4KMZ8 207 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 KLHL22Q53GT1 634 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 ARMCX4Q5H9R4 360 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 KIRREL2Q6UWL6 708 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 HSDL2Q6YN16 418 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 SLC29A4Q7RTT9 530 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 C9orf40Q8IXQ3 194 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 SLC38A9Q8NBW4 561 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 S100ZQ8WXG8 99 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 GFM1Q96RP9 751 aaKnown RBP22.97■■□□□ 1.27
CTSA-203ENST00000372459 HHATLQ9HCP6 504 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 IL20RAQ9UHF4 553 aa22.97■■□□□ 1.27
CTSA-203ENST00000372459 IRGMA1A4Y4 181 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 OR6C76A6NM76 312 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 KDM4EB2RXH2 506 aaPredicted RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 HBQ1P09105 142 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 LCN1P31025 176 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 LINC00114Q6XXX2 140 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 SLC46A3Q7Z3Q1 461 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 SLC34A3Q8N130 599 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 GTPBP2Q9BX10 602 aaKnown RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 UBQLN3Q9H347 655 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 AKIP1Q9NQ31 210 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 MRPS18AQ9NVS2 196 aaKnown RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 EFCAB9A8MZ26 197 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 RAB36O95755 333 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 FUT1P19526 365 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 LSM3P62310 102 aaKnown RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 DCDP81605 110 aaKnown RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 PHF19Q5T6S3 580 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 FNDC7Q5VTL7 733 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 SHISA6Q6ZSJ9 500 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 LANCL3Q6ZV70 420 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 SLCO6A1Q86UG4 719 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 PPP1R3BQ86XI6 285 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 FAM71CQ8NEG0 241 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 DNAJA4Q8WW22 397 aaPredicted RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 OR5M11Q96RB7 305 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 WWTR1Q9GZV5 400 aa22.96■■□□□ 1.27
CTSA-203ENST00000372459 DIMT1Q9UNQ2 313 aaKnown RBP22.96■■□□□ 1.27
CTSA-203ENST00000372459 RFPL3O75679 317 aa22.95■■□□□ 1.26
CTSA-203ENST00000372459 HSMCR30P0CW71 290 aa22.95■■□□□ 1.26
CTSA-203ENST00000372459 IDUAP35475 653 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms