RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 RAPGEF5Q92565 580 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 MRPL24Q96A35 216 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ISG20Q96AZ6 181 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 RBMXL1Q96E39 390 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 C12orf66Q96MD2 445 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 DNTTIP1Q9H147 329 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 TMEM185BQ9H7F4 350 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 Q9HAA7 133 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 IL1RL2Q9HB29 575 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 C1orf123Q9NWV4 160 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 KIAA1257Q9ULG3 409 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 RASD1Q9Y272 281 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 IFT52Q9Y366 437 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 FRMPD3Q5JV73 1810 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 HYDINQ4G0P3 5121 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 NEDD4P46934 1319 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 RIC1Q4ADV7 1423 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ITPR1Q14643 2758 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 EPPK1P58107 5090 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 LOC100653049A0A140TA62 436 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 LOC390937A0A1W2PQ73 354 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ERICH4A6NGS2 130 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 C9JVG2 144 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SURF4O15260 269 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 TAPBPO15533 448 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 N4BP1O75113 896 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 KHDRBS3O75525 346 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 KRT34O76011 436 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 NXPH2O95156 264 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 OAZ2O95190 189 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CLDN9O95484 217 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 IGF1P05019 195 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 UBTFL6P0CB48 400 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 MCF2P10911 925 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CYP11B1P15538 503 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 PRKACAP17612 351 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 MSR1P21757 451 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 GPR183P32249 361 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CDKN1BP46527 198 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 GYG1P46976 350 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 PDLIM4P50479 330 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 EFNB2P52799 333 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 RGS8P57771 180 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 EIF3EP60228 445 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 RPL27P61353 136 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 NTHL1P78549 312 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 PHEXP78562 749 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CDR2Q01850 454 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SRSF4Q08170 494 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 BST2Q10589 180 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 DOC2AQ14183 400 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CAMK4Q16566 473 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 LRRC26Q2I0M4 334 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CELF3Q5SZQ8 465 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 OR4F3Q6IEY1 312 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 BHLHB9Q6PI77 547 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ZNF730Q6ZMV8 503 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ANO5Q75V66 913 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SSX9Q7RTT3 188 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 H2BFWTQ7Z2G1 175 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SCD5Q86SK9 330 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 MOB3BQ86TA1 216 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 NAGSQ8N159 534 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 C15orf54Q8N8G6 183 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ZNF383Q8NA42 475 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SPERTQ8NA61 448 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 DMBX1Q8NFW5 382 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 OR1F12Q8NHA8 337 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SCFD1Q8WVM8 642 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CIDECQ96AQ7 238 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 TSNARE1Q96NA8 513 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 GPR174Q9BXC1 333 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ROPN1BQ9BZX4 212 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ILKAPQ9H0C8 392 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SLC25A51Q9H1U9 297 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CXXC4Q9H2H0 198 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 LRRN3Q9H3W5 708 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 GPN2Q9H9Y4 310 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 MAN2C1Q9NTJ4 1040 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 INTS9Q9NV88 658 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 FAM120CQ9NX05 1096 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 OCIAD1Q9NX40 245 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 DUS2Q9NX74 493 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 TEX10Q9NXF1 929 aaPredicted RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 CFAP45Q9UL16 551 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 EXOSC1Q9Y3B2 195 aaKnown RBP1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ZHX2Q9Y6X8 837 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 TTC3P53804 2025 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 ZNF521Q96K83 1311 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 NOTCH1P46531 2555 aa1.55□□□□□ -2.16
UBE2A-203ENST00000371569 SAA2-SAA4A0A096LPE2 208 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 TRBV11-1A0A0K0K1C0 115 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 OR5H15A6NDH6 313 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 GOLGA8SH3BPF8 625 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 INPP4BO15327 924 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 MSH4O15457 936 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 ARHGEF9O43307 516 aa1.54□□□□□ -2.16
UBE2A-203ENST00000371569 TNFSF12O43508 249 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms