RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GRM7Q14831 915 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 PSAPL1Q6NUJ1 521 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 BPHLQ86WA6 291 aaPredicted RBP11.74□□□□□ -0.53
HCFC1-202ENST00000369984 GIMAP1Q8WWP7 306 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 APIPQ96GX9 242 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 PINK1Q9BXM7 581 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 SLC19A3Q9BZV2 496 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 THSD1Q9NS62 852 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 A8MVM7 634 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 TMEM11P17152 192 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 FDXRP22570 491 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 FCER1GP30273 86 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 CCNJQ5T5M9 372 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 OR4K5Q8NGD3 323 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 LUZP4Q9P127 313 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 MARCH4Q9P2E8 410 aaPredicted RBP11.74□□□□□ -0.53
HCFC1-202ENST00000369984 RPH3ALQ9UNE2 315 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 ENPP4Q9Y6X5 453 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 SNNO75324 88 aaPredicted RBP11.74□□□□□ -0.53
HCFC1-202ENST00000369984 GJB5O95377 273 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 LIPCP11150 499 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 LAMP1P11279 417 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 ERVPABLB-1P60509 514 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 FAM122AQ96E09 287 aa11.74□□□□□ -0.53
HCFC1-202ENST00000369984 INTS6Q9UL03 887 aaKnown RBP11.74□□□□□ -0.53
HCFC1-202ENST00000369984 ZFC3H1O60293 1989 aaKnown RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 KLHL33A6NCF5 533 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 TAP2Q03519 686 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 IER5LQ5T953 404 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 PLCXD3Q63HM9 321 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 DNAJB11Q9UBS4 358 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF891A8MT65 544 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF28P17035 718 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 RGNQ15493 299 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 BEX5Q5H9J7 111 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 BAGE3Q86Y29 109 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 BAGE2Q86Y30 109 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 MFSD6LQ8IWD5 586 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 NAGSQ8N159 534 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 CYB561A3Q8NBI2 242 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 OR9A2Q8NGT5 310 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ACKR4Q9NPB9 350 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 P2RX6O15547 441 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SRPX2O60687 465 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 NDUFB2O95178 105 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SPINT3P49223 89 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 GATMP50440 423 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 HNRNPFP52597 415 aaKnown RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 RSPRY1Q96DX4 576 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 HHIPL1Q96JK4 782 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 APOBEC3BQ9UH17 382 aaKnown RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 FBXO7Q9Y3I1 522 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 DNAJC15Q9Y5T4 150 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 H7C1Q1 480 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ADAM10O14672 748 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SSTR2P30874 369 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 MC3RP41968 323 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 P2RY14Q15391 338 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 APOOLQ6UXV4 268 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 IGSF8Q969P0 613 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 UFSP2Q9NUQ7 469 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 A6NIZ1 184 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 NME4O00746 187 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 CRHBPP24387 322 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 RAP1BP61224 184 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 RAP1AP62834 184 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 HHEXQ03014 270 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SLC10A2Q12908 348 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 CEACAM7Q14002 265 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 LRRC28Q86X40 367 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 HAVCR2Q8TDQ0 301 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 UPRTQ96BW1 309 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF587Q96SQ5 575 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 KIF25Q9UIL4 384 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 RIMS3Q9UJD0 308 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 FBXO45P0C2W1 286 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 TECPR1Q7Z6L1 1165 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SORCS2Q96PQ0 1159 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 OCSTAMPQ9BR26 566 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 SLC6A14Q9UN76 642 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 PIRO00625 290 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 CCL5P13501 91 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 HLA-DMAP28067 261 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 ETV4P43268 484 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 UBE2G2P60604 165 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 PIN1Q13526 163 aaPredicted RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 GDPGP1Q6ZNW5 385 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 LARP4Q71RC2 724 aaKnown RBP eCLIP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 TMEM135Q86UB9 458 aa11.73□□□□□ -0.53
HCFC1-202ENST00000369984 FUBP1Q96AE4 644 aaKnown RBP11.73□□□□□ -0.53
HCFC1-202ENST00000369984 INTS14Q96SY0 518 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms