RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 GTF2H4Q92759 462 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 MRGPRX4Q96LA9 322 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 MAGEB18Q96M61 343 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 ZNF559Q9BR84 538 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 CRIM1Q9NZV1 1036 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 PACSIN3Q9UKS6 424 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 LIPT1Q9Y234 373 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 AKAP9Q99996 3911 aa18.42■□□□□ 0.54
SMNDC1-201ENST00000369592 EEF1E1-BLOC1S5C9J1V9 151 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 EIF1AYO14602 144 aaKnown RBP18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 EEF1E1O43324 174 aaKnown RBP18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 H6PDO95479 791 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 CHRM4P08173 479 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 RPS4Y1P22090 263 aaKnown RBP18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 KIR2DL3P43628 341 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 DAZAP2Q15038 168 aaPredicted RBP18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 SYPL1Q16563 259 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 VWA1Q6PCB0 445 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 LRRC74BQ6ZQY2 392 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 P4HA3Q7Z4N8 544 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 BTLAQ7Z6A9 289 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 LILRA2Q8N149 483 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 OR2V1Q8NHB1 315 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 FAM222BQ8WU58 562 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 VPS33AQ96AX1 596 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 LRRC46Q96FV0 321 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 ZNF446Q9NWS9 450 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 PAQR5Q9NXK6 330 aaPredicted RBP18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 GALNT8Q9NY28 637 aa18.41■□□□□ 0.54
SMNDC1-201ENST00000369592 FREM1Q5H8C1 2179 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 ADAM11O75078 769 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 CTAG2O75638 210 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 KRT75O95678 551 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 CSTAP01040 98 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 OPN1LWP04000 364 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 EIF1AXP47813 144 aaKnown RBP18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 AQP5P55064 265 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 QPRTQ15274 297 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 GTDC1Q4AE62 458 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 TIGD2Q4W5G0 525 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 BLOC1S3Q6QNY0 202 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 EIF3MQ7L2H7 374 aaKnown RBP18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 KIF18BQ86Y91 864 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 ZNF614Q8N883 585 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 PMM1Q92871 262 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 ITCHQ96J02 903 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 KLHL15Q96M94 604 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 RBM24Q9BX46 236 aaKnown RBP18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 PAIP1Q9H074 479 aaKnown RBP18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 TMEM45AQ9NWC5 275 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 SLC35A3Q9Y2D2 325 aa18.4■□□□□ 0.54
SMNDC1-201ENST00000369592 AGAP5A6NIR3 686 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 TNFSF11O14788 317 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 POLR3GO15318 223 aaPredicted RBP18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 CXCL13O43927 109 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 CD8BP10966 210 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 FCGR2AP12318 317 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 KCNJ10P78508 379 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 MYBPHQ13203 477 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 CBFBQ13951 182 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 ZNF474Q6S9Z5 364 aaPredicted RBP18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 ZZZ3Q8IYH5 903 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 PNPT1Q8TCS8 783 aaKnown RBP18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 ST8SIA1Q92185 356 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 OSTF1Q92882 214 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 THUMPD3Q9BV44 507 aaKnown RBP18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 QRSL1Q9H0R6 528 aaKnown RBP18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 TMEM185BQ9H7F4 350 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 RMND5AQ9H871 391 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 COQ10BQ9H8M1 238 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 TPT1P8Q9HAU6 139 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 EXOSC3Q9NQT5 275 aaKnown RBP18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 GMEB1Q9Y692 573 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 DSPPQ9NZW4 1301 aa18.39■□□□□ 0.53
SMNDC1-201ENST00000369592 SS18L1O75177 396 aaPredicted RBP18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 BMP2P12643 396 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 CD1EP15812 388 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 ANXA11P50995 505 aaKnown RBP18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 ATP4BP51164 291 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 SESN3P58005 492 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 IRX1P78414 480 aaPredicted RBP18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 SGCBQ16585 318 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 GPAT3Q53EU6 434 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 LRIF1Q5T3J3 769 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 HBMQ6B0K9 141 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 DNAJC14Q6Y2X3 702 aaPredicted RBP18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 FAM214BQ7L5A3 538 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 LUZP2Q86TE4 346 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 MSRB3Q8IXL7 192 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 DYDC1Q8WWB3 177 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 ZNF385DQ9H6B1 395 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 MTHFD2LQ9H903 347 aaPredicted RBP18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 ACER3Q9NUN7 267 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 PCDHB14Q9Y5E9 798 aa18.38■□□□□ 0.53
SMNDC1-201ENST00000369592 HIVEP1P15822 2718 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 NF1P21359 2839 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 CLDN24A6NM45 220 aa18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 EDF1O60869 148 aaKnown RBP18.37■□□□□ 0.53
SMNDC1-201ENST00000369592 NUDT14O95848 222 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms