RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PDLIM1O00151 329 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 DDX5P17844 614 aaKnown RBP12.71□□□□□ -0.37
VAMP4-202ENST00000367740 SLC7A1P30825 629 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 NTF4P34130 210 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 ARL4CP56559 192 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 ZNF117Q03924 483 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
VAMP4-202ENST00000367740 PRSS53Q2L4Q9 553 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 GGTA1PQ4G0N0 100 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 ABLIM2Q6H8Q1 611 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 FAHD2BQ6P2I3 314 aaPredicted RBP12.71□□□□□ -0.37
VAMP4-202ENST00000367740 C1QL2Q7Z5L3 287 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 MISPQ8IVT2 679 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 C17orf78Q8N4C9 275 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 OR51F2Q8NH61 342 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 UBASH3BQ8TF42 649 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 FAHD2AQ96GK7 314 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 NSUN5Q96P11 429 aaKnown RBP12.71□□□□□ -0.37
VAMP4-202ENST00000367740 BBS4Q96RK4 519 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 NARFLQ9H6Q4 476 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 BRF2Q9HAW0 419 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.37
VAMP4-202ENST00000367740 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
VAMP4-202ENST00000367740 IGKV3D-15A0A087WSY6 115 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 SLITRK5O94991 958 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 IGFBP1P08833 259 aaPredicted RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 NCBP2P52298 156 aaKnown RBP eCLIP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 RAE1P78406 368 aaKnown RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 TOMM34Q15785 309 aaPredicted RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 C9orf135Q5VTT2 229 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 BPIFB2Q8N4F0 458 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 TEX29Q8N6K0 151 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 OR4F6Q8NGB9 312 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 OR52E4Q8NGH9 312 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 ZNF524Q96C55 264 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 C1QTNF5Q9BXJ0 243 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 RACGAP1Q9H0H5 632 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 LZTFL1Q9NQ48 299 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 G6PC2Q9NQR9 355 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 DDX28Q9NUL7 540 aaKnown RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 EMC3Q9P0I2 261 aa12.7□□□□□ -0.38
VAMP4-202ENST00000367740 CPSF2Q9P2I0 782 aaKnown RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 GPC6Q9Y625 555 aaPredicted RBP12.7□□□□□ -0.38
VAMP4-202ENST00000367740 IGHV1-18A0A0C4DH31 117 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 ZNF716A6NP11 495 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 E7ESA3 106 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
VAMP4-202ENST00000367740 WNT9BO14905 357 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 OIP5O43482 229 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 PCDH7O60245 1069 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 H6PDO95479 791 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 BCL10O95999 233 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 TFP02787 698 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 ERCC1P07992 297 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-202ENST00000367740 GAAP10253 952 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 PRKCAP17252 672 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 MAP3K8P41279 467 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 HEPACAMQ14CZ8 416 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 VHLLQ6RSH7 139 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 CBLN3Q6UW01 205 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 CARM1Q86X55 608 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 C1orf162Q8NEQ5 155 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-202ENST00000367740 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 SELENOMQ8WWX9 145 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 HOXB13Q92826 284 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-202ENST00000367740 SLITRK2Q9H156 845 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 EQTNQ9NQ60 294 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 PCTPQ9UKL6 214 aa12.69□□□□□ -0.38
VAMP4-202ENST00000367740 TRAV20A0A0B4J274 112 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 A0A1W2PQD3 144 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 TP73O15350 636 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 NKX2-2O95096 273 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 NUDT17P0C025 328 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 ADRA2CP18825 462 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 IL1RL1Q01638 556 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 LETMD1Q6P1Q0 360 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 PTGR2Q8N8N7 351 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-202ENST00000367740 ZNF527Q8NB42 609 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 C16orf78Q8WTQ4 265 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 CDKL2Q92772 493 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 ELP4Q96EB1 424 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 OR5B2Q96R09 309 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 TMPRSS13Q9BYE2 586 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 SHCBP1LQ9BZQ2 653 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 GLIPR2Q9H4G4 154 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 ACSS1Q9NUB1 689 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-202ENST00000367740 TREM2Q9NZC2 230 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 VPS29Q9UBQ0 182 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 DCTN4Q9UJW0 460 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-202ENST00000367740 ICAM5Q9UMF0 924 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 ACTL7BQ9Y614 415 aa12.68□□□□□ -0.38
VAMP4-202ENST00000367740 WNK2Q9Y3S1 2297 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 GNG14A0A1W2PPG7 69 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms