RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR5M8Q8NGP6 311 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC25A43Q8WUT9 341 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PABPC5Q96DU9 382 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CELF6Q96J87 481 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FAM84BQ96KN1 310 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 STACQ99469 402 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 COLEC11Q9BWP8 271 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PBX4Q9BYU1 374 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GAR1Q9NY12 217 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF222Q9UK12 451 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 A0A0G2JN53 185 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MEP1AQ16819 746 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ACOT7LQ6ZUV0 252 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 IRF2BP1Q8IU81 584 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SPRYD4Q8WW59 207 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HHIPQ96QV1 700 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 COL25A1Q9BXS0 654 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RALYQ9UKM9 306 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 DMRT1Q9Y5R6 373 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FZD9O00144 591 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MXD1Q05195 221 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PLPP5Q8NEB5 264 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF516Q92618 1163 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FGFBP2Q9BYJ0 223 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ARL6Q9H0F7 186 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GABRR3A8MPY1 467 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FRKP42685 505 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HLA-BQ31612 363 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 APOOLQ6UXV4 268 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GPR137CQ8N3F9 429 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR6N1Q8NGY5 312 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SPPL2BQ8TCT7 592 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 KCNC2Q96PR1 638 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF559Q9BR84 538 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BPIFA1Q9NP55 256 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AKIP1Q9NQ31 210 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1B0GV50 99 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MAZP56270 477 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AAK1Q2M2I8 961 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 KDM4DQ6B0I6 523 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC18B1Q6NT16 456 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FAM180BQ6P0A1 224 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 LINC00596Q86U02 117 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 NUDT13Q86X67 352 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BCO2Q9BYV7 579 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ESRP2Q9H6T0 727 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MRPL15Q9P015 296 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CACNG2Q9Y698 323 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 C17orf112F2Z3M2 114 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC31A2O15432 143 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CFHP08603 1231 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BCKDHBP21953 392 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CATSPEREQ5SY80 951 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 LBX2Q6XYB7 198 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 DBF4BQ8NFT6 615 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 NIPSNAP2O75323 286 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MTHFD2P13995 350 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PLGLAQ15195 96 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 C2orf76Q3KRA6 126 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FUT10Q6P4F1 479 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC24A5Q71RS6 500 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SIRT5Q9NXA8 310 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CDC14AQ9UNH5 594 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SNED1Q8TER0 1413 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HLA-DQB1P01920 261 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FPR3P25089 353 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM69Q5SWH9 247 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FRRS1Q6ZNA5 592 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SLC46A3Q7Z3Q1 461 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SUMF1Q8NBK3 374 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR10G2Q8NGC3 310 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FIGNL2A6NMB9 653 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CSO75390 466 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 JAG1P78504 1218 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FLYWCH1Q4VC44 716 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PRPF38BQ5VTL8 546 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 PCGF1Q9BSM1 259 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SMPD4Q9NXE4 827 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 DBX1A6NMT0 343 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NFATC4Q14934 902 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RAI2Q9Y5P3 530 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 SEC22BO75396 215 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MARCKSL1P49006 195 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GSK3BP49841 420 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CYBRD1Q53TN4 286 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 CPZQ66K79 652 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM71Q6P5X7 295 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 UBE3DQ7Z6J8 389 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NTNG2Q96CW9 530 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 RNF2Q99496 336 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 OR12D3Q9UGF7 316 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ARL5AQ9Y689 179 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 FTCDNL1E5RQL4 147 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TFAP2AP05549 437 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 Q8IYB0 196 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 DPH7Q9BTV6 452 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GATA5Q9BWX5 397 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM121BQ9BXQ6 578 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HIF3AQ9Y2N7 669 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 A0A0U1RQS6 177 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms