RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KLHL36Q8N4N3 616 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 OR2L5Q8NG80 312 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 OR4F15Q8NGB8 312 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 OR7D2Q96RA2 312 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 KCNN2Q9H2S1 579 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 ERVMER34-1Q9H9K5 563 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 KLHL28Q9NXS3 571 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 UBQLN2Q9UHD9 624 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 CHST2Q9Y4C5 530 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 OR5F1O95221 314 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 HMGN1P05114 100 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 F3P13726 295 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 GABRG2P18507 467 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 MPIP34949 423 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 RFX3P48380 749 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 BAMBIQ13145 260 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 PLEKHM3Q6ZWE6 761 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 RRM2BQ7LG56 351 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 ACOT4Q8N9L9 421 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 OR4Q3Q8NH05 313 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 HSD17B8Q92506 261 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 CLDN23Q96B33 292 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 TIMM29Q9BSF4 260 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 DPAGT1Q9H3H5 408 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 SLC6A20Q9NP91 592 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 NTMQ9P121 344 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 SCML1Q9UN30 329 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 HRO43593 1189 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 PRICKLE3O43900 615 aaPredicted RBP13.65□□□□□ -0.22
PRKN-204ENST00000366896 KCNJ13O60928 360 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.22
PRKN-204ENST00000366896 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
PRKN-204ENST00000366896 CERS1P27544 350 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 RBMS1P29558 406 aaKnown RBP13.65□□□□□ -0.22
PRKN-204ENST00000366896 MC3RP41968 323 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 CAMK2DQ13557 499 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 NUMA1Q14980 2115 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 IDNKQ5T6J7 187 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 B3GLCTQ6Y288 498 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 BBS1Q8NFJ9 593 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 OR6C4Q8NGE1 309 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 RBP7Q96R05 134 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 IL20RAQ9UHF4 553 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 KCNK6Q9Y257 313 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 NUBP2Q9Y5Y2 271 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 FKBP7Q9Y680 259 aa13.65□□□□□ -0.22
PRKN-204ENST00000366896 J3QRE1 110 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 TRIM23P36406 574 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 GPR4P46093 362 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 PGGHGQ32M88 737 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 ZNF791Q3KP31 576 aaPredicted RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 HBMQ6B0K9 141 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 HEPHL1Q6MZM0 1159 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 ZNF620Q6ZNG0 422 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 OAFQ86UD1 273 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 NKAIN4Q8IVV8 208 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 OR9A2Q8NGT5 310 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 PCNPQ8WW12 178 aaKnown RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 ELP4Q96EB1 424 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 ZNF681Q96N22 645 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 CHRDQ9H2X0 955 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 NLGN3Q9NZ94 848 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 PLEKHM1Q9Y4G2 1056 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 DOCK9Q9BZ29 2069 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 TEX13CA0A0J9YWL9 993 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 A0A1B0GVI7 797 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 PRR19A6NJB7 356 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 DUXAA6NLW8 204 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 DVL2O14641 736 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 PIP5K1CO60331 668 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 AGR2O95994 175 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 TCRBP04435 133 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 EIF4EP06730 217 aaKnown RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 PITPNBP48739 271 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 MTNR1BP49286 362 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 RNF144AP50876 292 aaPredicted RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 ZNF81P51508 661 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 RIPPLY1Q0D2K3 151 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 LTB4RQ15722 352 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 HACD4Q5VWC8 232 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 KIAA1324Q6UXG2 1013 aaKnown RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 MBOAT2Q6ZWT7 520 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 NUP43Q8NFH3 380 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 MRPS30Q9NP92 439 aaKnown RBP13.64□□□□□ -0.23
PRKN-204ENST00000366896 UCKL1Q9NWZ5 548 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 KLF15Q9UIH9 416 aa13.64□□□□□ -0.23
PRKN-204ENST00000366896 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 MEIKINA0A087WXM9 373 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 A8MUA0 341 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 SCAMP1O15126 338 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 EEF1E1O43324 174 aaKnown RBP13.63□□□□□ -0.23
PRKN-204ENST00000366896 SLC2A10O95528 541 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 THY1P04216 161 aa13.63□□□□□ -0.23
PRKN-204ENST00000366896 CD53P19397 219 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms