RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PDIK1LQ8N165 341 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 CDYL2Q8N8U2 506 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF540Q8NDQ6 660 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 TSPAN17Q96FV3 270 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 REXO5Q96IC2 774 aaKnown RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 MUS81Q96NY9 551 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 GPR78Q96P69 363 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 RBBP8Q99708 897 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 LMF2Q9BU23 707 aaKnown RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC35C2Q9NQQ7 365 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 STOML1Q9UBI4 398 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 PSME2Q9UL46 239 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 C19orf53Q9UNZ5 99 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 USP22Q9UPT9 525 aa7.37□□□□□ -1.23
HMGB1P39-201ENST00000366304 CCT8L1PA6NM43 557 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF724A8MTY0 619 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 MYO1GB0I1T2 1018 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 CYTIPO60759 359 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 JUNP05412 331 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 SSTR1P30872 391 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 SERPINF1P36955 418 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 ALDH18A1P54886 795 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 SNRPD2P62316 118 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 PDIA2Q13087 525 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 PPP1R7Q15435 360 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 NDUFAF6Q330K2 333 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 GLE1Q53GS7 698 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 CBLN3Q6UW01 205 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 SPATA19Q7Z5L4 167 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 GLCCI1Q86VQ1 547 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 GAS2L3Q86XJ1 694 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF100Q8IYN0 542 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 FAM9CQ8IZT9 166 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 OR2L13Q8N349 312 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF527Q8NB42 609 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 OR52E4Q8NGH9 312 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZFP90Q8TF47 636 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 TMEM186Q96B77 213 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 LRRC39Q96DD0 335 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 PKP2Q99959 881 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 FAIM2Q9BWQ8 316 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 RACGAP1Q9H0H5 632 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 CDC42EP4Q9H3Q1 356 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 PLK3Q9H4B4 646 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 UNKLQ9H9P5 680 aaKnown RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 SEC61A2Q9H9S3 476 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 NMRAL1Q9HBL8 299 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 MYOZ1Q9NP98 299 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 LZTFL1Q9NQ48 299 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 AHSPQ9NZD4 102 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF225Q9UK10 706 aa7.36□□□□□ -1.23
HMGB1P39-201ENST00000366304 A0A087WV62 115 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 TMEM129A0AVI4 362 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 CIB4A0PJX0 185 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 HMX2A2RU54 273 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF716A6NP11 495 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 B4DSR2 109 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 E7ESA3 106 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 GUCY1B2O75343 617 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ESRRBO95718 433 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 NGFRP08138 427 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 OR4A8P0C604 315 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 GFAPP14136 432 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ADRA2CP18825 462 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 TSPAN8P19075 237 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 LIMS1P48059 325 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 FNTAP49354 379 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 CLK3P49761 638 aaKnown RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 IDH3GP51553 393 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF41P51814 821 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 RAC3P60763 192 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 TRA2BP62995 288 aaKnown RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF117Q03924 483 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 LETMD1Q6P1Q0 360 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 SSX8Q7RTT4 187 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 GALNT5Q7Z7M9 940 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 UBE2J2Q8N2K1 259 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC43A2Q8N370 569 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 ZNF786Q8N393 782 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC16A11Q8NCK7 471 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 OR4F6Q8NGB9 312 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 CLDND2Q8NHS1 167 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 FBXO30Q8TB52 745 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 C16orf78Q8WTQ4 265 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 HOXB13Q92826 284 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 C1orf147Q96MC9 270 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 LRRC37BQ96QE4 947 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 NARFLQ9H6Q4 476 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 FKRPQ9H9S5 495 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 Q9N2J8 555 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 TIGARQ9NQ88 270 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 G6PC2Q9NQR9 355 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 SLC17A5Q9NRA2 495 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 CA10Q9NS85 328 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 TREM2Q9NZC2 230 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 CPSF2Q9P2I0 782 aaKnown RBP7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 KLHL9Q9P2J3 617 aa7.35□□□□□ -1.23
HMGB1P39-201ENST00000366304 MCM8Q9UJA3 840 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms