RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 CCR4P51679 360 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 RAD23AP54725 363 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 SRSF6Q13247 344 aaKnown RBP16.47■□□□□ 0.23
CCDC7-203ENST00000362006 PODNL1Q6PEZ8 512 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 RNF113BQ8IZP6 322 aaKnown RBP16.47■□□□□ 0.23
CCDC7-203ENST00000362006 CYP4Z2PQ8N1L4 340 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 BEST3Q8N1M1 668 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 FRMD6Q96NE9 622 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 BARD1Q99728 777 aaKnown RBP16.47■□□□□ 0.23
CCDC7-203ENST00000362006 ANGPTL4Q9BY76 406 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 ING2Q9H160 280 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 ZNF556Q9HAH1 456 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 SMPD3Q9NY59 655 aaPredicted RBP16.47■□□□□ 0.23
CCDC7-203ENST00000362006 PPP4R1LQ9P1A2 415 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 MGAT4BQ9UQ53 548 aa16.47■□□□□ 0.23
CCDC7-203ENST00000362006 CDH2P19022 906 aaPredicted RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 WT1P19544 449 aaPredicted RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 PLA2G5P39877 138 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 PTGDSP41222 190 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 IDH2P48735 452 aaKnown RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 AGAP7PQ5VUJ5 663 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 KDM4DQ6B0I6 523 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 APLFQ8IW19 511 aaPredicted RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 CADM2Q8N3J6 435 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 ZNF563Q8TA94 476 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 SH3YL1Q96HL8 342 aaPredicted RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 AGAP4Q96P64 663 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 FEVQ99581 238 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 SMURF2Q9HAU4 748 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 C12orf10Q9HB07 376 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 KRCC1Q9NPI7 259 aaPredicted RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 TLX3O43711 291 aaPredicted RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 OR10H3O60404 316 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 THY1P04216 161 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 RBM34P42696 430 aaKnown RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 LAPTM4AQ15012 233 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 ALG10BQ5I7T1 473 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 ZNF730Q6ZMV8 503 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 UTP23Q9BRU9 249 aaKnown RBP16.46■□□□□ 0.23
CCDC7-203ENST00000362006 CFAP54Q96N23 3096 aa16.46■□□□□ 0.23
CCDC7-203ENST00000362006 ANKUB1A6NFN9 424 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 SNX4O95219 450 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 LYPD3O95274 346 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 PNMTP11086 282 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 IGFBP5P24593 272 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 SLC1A3P43003 542 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 DAPP51397 102 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 SEC23BQ15437 767 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 COL28A1Q2UY09 1125 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 ZNF770Q6IQ21 691 aaPredicted RBP16.45■□□□□ 0.22
CCDC7-203ENST00000362006 ISLR2Q6UXK2 745 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 OR4K5Q8NGD3 323 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 TMEM234Q8WY98 164 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 NTNG2Q96CW9 530 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 Q9H521 79 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 GALNT9Q9HCQ5 603 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 ENOPH1Q9UHY7 261 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 RAB26Q9ULW5 256 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 CPAMD8Q8IZJ3 1885 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 A0A087WUU8 490 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 C7orf72A4D263 438 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 NUDT14O95848 222 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 ADAP00813 363 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 P04436 131 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 FUT4P22083 530 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 FOXD4Q12950 439 aaPredicted RBP16.45■□□□□ 0.22
CCDC7-203ENST00000362006 NKAIN4Q8IVV8 208 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 GPR119Q8TDV5 335 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 PRSS27Q9BQR3 290 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 DGCR6LQ9BY27 220 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 TIMMDC1Q9NPL8 285 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 KRT84Q9NSB2 600 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 SACM1LQ9NTJ5 587 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 SSUH2Q9Y2M2 353 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 PCDHGB6Q9Y5F9 930 aa16.45■□□□□ 0.22
CCDC7-203ENST00000362006 GP1BBP13224 206 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 CBLP22681 906 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 OC90Q02509 493 aaPredicted RBP16.44■□□□□ 0.22
CCDC7-203ENST00000362006 ZNF468Q5VIY5 522 aaPredicted RBP16.44■□□□□ 0.22
CCDC7-203ENST00000362006 BICRALQ6AI39 1079 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 LINC00114Q6XXX2 140 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 MBOAT2Q6ZWT7 520 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 PIGXQ8TBF5 258 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 RNF217Q8TC41 542 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 RNF32Q9H0A6 362 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 CCDC86Q9H6F5 360 aaKnown RBP16.44■□□□□ 0.22
CCDC7-203ENST00000362006 TMEFF2Q9UIK5 374 aaPredicted RBP16.44■□□□□ 0.22
CCDC7-203ENST00000362006 POFUT2Q9Y2G5 429 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 C15orf41Q9Y2V0 281 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 MED13Q9UHV7 2174 aa16.44■□□□□ 0.22
CCDC7-203ENST00000362006 HTR3EA5X5Y0 456 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 EFSO43281 561 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 CDC40O60508 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC7-203ENST00000362006 CCL3P10147 92 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 ACADSP16219 412 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 HTR3AP46098 478 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 UGT2B15P54855 530 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 C1orf94Q6P1W5 598 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 AQP11Q8NBQ7 271 aa16.43■□□□□ 0.22
CCDC7-203ENST00000362006 OR9Q2Q8NGE9 314 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms