RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CRHBPP24387 322 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 CTXN1P60606 82 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 BAXQ07812 192 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ADIRFQ15847 76 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 FAM162BQ5T6X4 162 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 LPCAT3Q6P1A2 487 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 MED1Q15648 1581 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 FBXO24O75426 580 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 MBP02144 154 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 HOXB2P14652 356 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 CXADRP78310 365 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF33BQ06732 778 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 CDONQ4KMG0 1287 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM71Q6P5X7 295 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 PIGMQ9H3S5 423 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 LIN7BQ9HAP6 207 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 EIF3FO00303 357 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 DHRS4L1P0CG22 281 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 DCAF4L2Q8NA75 395 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 HPSE2Q8WWQ2 592 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 RANGRFQ9HD47 186 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 AK6Q9Y3D8 172 aaKnown RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 C4orf32Q8N8J7 132 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 MAP3K3Q99759 626 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 MROH6A6NGR9 719 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 CLDN8P56748 225 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 BEX5Q5H9J7 111 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 SUSD3Q96L08 255 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 NKX6-2Q9C056 277 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ARV1Q9H2C2 271 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 FBXL4Q9UKA2 621 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 FAM96BQ9Y3D0 163 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ARHGAP33O14559 1287 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ACPPP15309 386 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 PCGF2P35227 344 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 STEAP3Q658P3 488 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TIGD3Q6B0B8 471 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 FGFBP2Q9BYJ0 223 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM59LQ9UK28 342 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 PTHP01270 115 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 MPC1LP0DKB6 136 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 POLR2CP19387 275 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SNCAP37840 140 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 LTBQ06643 244 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PAGE3Q5JUK9 113 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF689Q96CS4 500 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PCDHA9Q9Y5H5 950 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ENPP4Q9Y6X5 453 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 KCNE1P15382 129 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 GIPRP48546 466 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 CXCR4P61073 352 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SIAH1Q8IUQ4 282 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 VGLL2Q8N8G2 317 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 HUS1BQ8NHY5 278 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ATXN7L1Q9ULK2 861 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SSTR4P31391 388 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PMPCAQ10713 525 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TNK1Q13470 666 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF805Q5CZA5 627 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 KLHDC1Q8N7A1 406 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ECHDC3Q96DC8 303 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 C1orf74Q96LT6 269 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SLC39A9Q9NUM3 307 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SLC23A2Q9UGH3 650 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF623O75123 536 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF28P17035 718 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 M6PRP20645 277 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SSTR2P30874 369 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ACKR4Q9NPB9 350 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 MYOCOSA0A1B0GUC4 107 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 CNKSR3Q6P9H4 555 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TECPR1Q7Z6L1 1165 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SIGLECL1Q8N7X8 197 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 OR4N2Q8NGD1 307 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM19Q96HH6 336 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF331Q9NQX6 463 aaPredicted RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 GDI1P31150 447 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM244Q5VVB8 128 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNRF4Q8WWF5 429 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 PSMF1Q92530 271 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF586Q9NXT0 402 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 CNOT2Q9NZN8 540 aaKnown RBP8.76□□□□□ -1.01
VPS13A-203ENST00000360280 POLHQ9Y253 713 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 NID2Q14112 1375 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 CBY3A6NI87 242 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 TNFRSF10AO00220 468 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 B4GAT1O43505 415 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 HBQ1P09105 142 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 DEFB134Q4QY38 66 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SERPINA11Q86U17 422 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 GLB1L2Q8IW92 636 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 CRB3Q9BUF7 120 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 ANKRD19PQ9H560 264 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 MYOTQ9UBF9 498 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 GPR160Q9UJ42 338 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 RASD1Q9Y272 281 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 SEC14L5O43304 696 aa8.76□□□□□ -1.01
VPS13A-203ENST00000360280 CD1DP15813 335 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms