RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 PCTPQ9UKL6 214 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 CHST2Q9Y4C5 530 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ASB1Q9Y576 335 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 OR2W5A6NFC9 320 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 C5orf52A6NGY3 159 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 OR51F1A6NGY5 319 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 GABRR3A8MPY1 467 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 EEF1E1O43324 174 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MPZL2O60487 215 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 DPM1O60762 260 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 GATBO75879 557 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 AKR7A3O95154 331 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MOCS2O96007 188 aaPredicted RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 B3GALT4O96024 378 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 C1QCP02747 245 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 CYC1P08574 325 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ANXA8P13928 327 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 GABRA1P14867 456 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 CPEP16870 476 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MST1P26927 711 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 HOXA6P31267 233 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 S100A11P31949 105 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 GKP32189 559 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 EIF2S3P41091 472 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 PRLHRP49683 370 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 GPR15P49685 360 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 DHODHQ02127 395 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ITKQ08881 620 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MAP4K2Q12851 820 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ECH1Q13011 328 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 NFATC2Q13469 925 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ABRAXAS2Q15018 415 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 NCF4Q15080 339 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 PON3Q15166 354 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 DHCR24Q15392 516 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 RNF212Q495C1 297 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 PLK5Q496M5 336 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 KLHL26Q53HC5 615 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 C2orf16Q68DN1 1984 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MZT2AQ6P582 158 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SEZ6L2Q6UXD5 910 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SSX9Q7RTT3 188 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ANKRD46Q86W74 232 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 NAXDQ8IW45 347 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SERPINA12Q8IW75 414 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ZBTB2Q8N680 514 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 PROKR2Q8NFJ6 384 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 PXT1Q8NFP0 134 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 RXFP4Q8TDU9 374 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 C11orf24Q96F05 449 aaPredicted RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 TMEM41AQ96HV5 264 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MRGPRX3Q96LB0 322 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 INPP5KQ9BT40 448 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ADAT1Q9BUB4 502 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SLC12A9Q9BXP2 914 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 CHRNA10Q9GZZ6 450 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 QRSL1Q9H0R6 528 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 PELI2Q9HAT8 420 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SGK2Q9HBY8 427 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SLC6A20Q9NP91 592 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SERHLQ9NQF3 203 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 IMP3Q9NV31 184 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 ADAM29Q9UKF5 820 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 GSTK1Q9Y2Q3 226 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 MRPS17Q9Y2R5 130 aaKnown RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 SPIN1Q9Y657 262 aaPredicted RBP3.72□□□□□ -1.81
CNGA1-201ENST00000358519 HS3ST3A1Q9Y663 406 aa3.72□□□□□ -1.81
CNGA1-201ENST00000358519 NOTCH4Q99466 2003 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 SETXQ7Z333 2677 aaKnown RBP3.71□□□□□ -1.82
CNGA1-201ENST00000358519 CCDC163A0A0D9SF12 145 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 A0A1B0GVC2 190 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 LOC390937A0A1W2PQ73 354 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 A6NIN4 97 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 TMEM200CA6NKL6 621 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 ARHGEF33A8MVX0 844 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 UBE2CO00762 179 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 TXNL1O43396 289 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 SUSD5O60279 629 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 SLCO2B1O94956 709 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 KCNK5O95279 499 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 SERPINA3P01011 423 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 PEPDP12955 493 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 MUC1P15941 1255 aaPredicted RBP3.71□□□□□ -1.82
CNGA1-201ENST00000358519 UGT2B7P16662 529 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 NDUFB7P17568 137 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 PTPN6P29350 595 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 CNR2P34972 360 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 TRHRP34981 398 aaPredicted RBP3.71□□□□□ -1.82
CNGA1-201ENST00000358519 TSPAN7P41732 249 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 ACTR1BP42025 376 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 CDKN2CP42773 168 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 PCP4P48539 62 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 SPINT3P49223 89 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 DGKEP52429 567 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 CASP6P55212 293 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 RAB8AP61006 207 aa3.71□□□□□ -1.82
CNGA1-201ENST00000358519 RPS25P62851 125 aaKnown RBP3.71□□□□□ -1.82
CNGA1-201ENST00000358519 RNF4P78317 190 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms