RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 EGR4Q05215 589 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 NFATC3Q12968 1075 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 GANABQ14697 944 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZNF169Q14929 603 aaPredicted RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 DNAL1Q4LDG9 190 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 LCN8Q6JVE9 175 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 POMZP3Q6PJE2 187 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 KLHL17Q6TDP4 642 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ARPINQ7Z6K5 226 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 DHFR2Q86XF0 187 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 PLCZ1Q86YW0 608 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 NKAIN4Q8IVV8 208 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 SIAH3Q8IW03 269 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 C9orf43Q8TAL5 461 aaPredicted RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 TMCO6Q96DC7 493 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 OSBPL11Q9BXB4 747 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 NTN4Q9HB63 628 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 SACM1LQ9NTJ5 587 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 SUCOQ9UBS9 1254 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 SEC14L4Q9UDX3 406 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 A4GNTQ9UNA3 340 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 CORO2BQ9UQ03 480 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZNF337Q9Y3M9 751 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 TCRBV3S1A0A5B6 114 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 CPSF4LA6NMK7 179 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 ATP5HO75947 161 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 AGR2O95994 175 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 P04436 131 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 DBIP07108 87 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 SUCLG1P53597 346 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 CLDN20P56880 219 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 SESN3P58005 492 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 FLOT2Q14254 428 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 NRF1Q16656 503 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZNF324BQ6AW86 544 aaPredicted RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 TRILQ7L0X0 811 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 EIF3MQ7L2H7 374 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 CARM1Q86X55 608 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 PEX5LQ8IYB4 626 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 RPRMLQ8N4K4 120 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZADH2Q8N4Q0 377 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZNF527Q8NB42 609 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 FAM83FQ8NEG4 500 aaPredicted RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 OR52J3Q8NH60 311 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 BBS10Q8TAM1 723 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ADAMTS16Q8TE57 1224 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 FAM162AQ96A26 154 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 PYURFQ96I23 114 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ARL5BQ96KC2 179 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 LRGUKQ96M69 825 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 C5orf34Q96MH7 638 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 GPA33Q99795 319 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 PRSS27Q9BQR3 290 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 OR11A1Q9GZK7 315 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 SLC6A15Q9H2J7 730 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZNF703Q9H7S9 590 aaPredicted RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 ZFP64Q9NPA5 681 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 MED17Q9NVC6 651 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 ALKBH4Q9NXW9 302 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 CNIH4Q9P003 139 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 BAG5Q9UL15 447 aa3.65□□□□□ -1.83
LIG4-201ENST00000356922 RRP15Q9Y3B9 282 aaKnown RBP3.65□□□□□ -1.83
LIG4-201ENST00000356922 FREM1Q5H8C1 2179 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 IGLV3-32A0A0A0MS00 114 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 A0A1W2PQD3 144 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 ZNF814B7Z6K7 855 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 NPIPA5E9PKD4 350 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 TP53I11O14683 189 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 SNPHO15079 494 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 THBS1P07996 1170 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 GUSBP08236 651 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 UBL4AP11441 157 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 PEPDP12955 493 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 PRKCAP17252 672 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 PRKAR1BP31321 381 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 TMED10P49755 219 aaKnown RBP3.64□□□□□ -1.83
LIG4-201ENST00000356922 CDH12P55289 794 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 ACTR3P61158 418 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 PPIAP62937 165 aaKnown RBP3.64□□□□□ -1.83
LIG4-201ENST00000356922 C17orf67Q0P5P2 114 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 EPS8Q12929 822 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 SNTA1Q13424 505 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 EFR3AQ14156 821 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 QPRTQ15274 297 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 SEC23BQ15437 767 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 IGFBP7Q16270 282 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 PLPPR5Q32ZL2 321 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 EMC4Q5J8M3 183 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 ENTPD8Q5MY95 495 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 C1orf146Q5VVC0 180 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 HMBOX1Q6NT76 420 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 TMEM81Q6P7N7 255 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 C3P1Q6ZMU1 363 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 NCCRP1Q6ZVX7 275 aaPredicted RBP3.64□□□□□ -1.83
LIG4-201ENST00000356922 FKBP9P1Q75LS8 142 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 ADGRG3Q86Y34 549 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 WDFY1Q8IWB7 410 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 C1GALT1C1Q96EU7 318 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 NSMCE2Q96MF7 247 aa3.64□□□□□ -1.83
LIG4-201ENST00000356922 ARHGDIGQ99819 225 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms