RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TNFAIP8O95379 198 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 GASTP01350 101 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 POLR2IP36954 125 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 SSR4P51571 173 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 MYBPC1Q00872 1141 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 NPRL3Q12980 569 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 KEAP1Q14145 624 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 WDR88Q6ZMY6 472 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF440Q8IYI8 595 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 LSMEM1Q8N8F7 131 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 SLC38A4Q969I6 547 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 SH3YL1Q96HL8 342 aaPredicted RBP16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 THOC3Q96J01 351 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 PRSS27Q9BQR3 290 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 DGCR6LQ9BY27 220 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 RIBC2Q9H4K1 309 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 ENOPH1Q9UHY7 261 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 A0A087WUU8 490 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 A0A0B4J2E0 115 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 A0A1B0GWA3 101 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 A0A1B0GX12 115 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 B4DXG7 233 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 OR10H3O60404 316 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 PTGDSP41222 190 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 IL1RL1Q01638 556 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF468Q5VIY5 522 aaPredicted RBP16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 PGBD2Q6P3X8 592 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF613Q6PF04 617 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 OPN5Q6U736 354 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 IL20RBQ6UXL0 311 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 OR4K5Q8NGD3 323 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 ASB15Q8WXK1 588 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 TRIM2Q9C040 744 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF696Q9H7X3 374 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 TMEM27Q9HBJ8 222 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 GALNT9Q9HCQ5 603 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 NDRG4Q9ULP0 352 aaKnown RBP16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 ICAM5Q9UMF0 924 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 CHCHD2Q9Y6H1 151 aaPredicted RBP16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 ASPMQ8IZT6 3477 aa16.58■□□□□ 0.24
SMARCD3-202ENST00000356800 C2orf72A6NCS6 295 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 BCKDKO14874 412 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 HCRTR2O43614 444 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 EIF4E2O60573 245 aaKnown RBP16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 THAP5Q7Z6K1 395 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 C8orf59Q8N0T1 100 aaPredicted RBP16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 TMCO5AQ8N6Q1 288 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 DUSP19Q8WTR2 217 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 TMEM255BQ8WV15 326 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 PITX2Q99697 317 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 SCNM1Q9BWG6 230 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 HRH3Q9Y5N1 445 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 CELSR3Q9NYQ7 3312 aa16.57■□□□□ 0.24
SMARCD3-202ENST00000356800 NKX2-8O15522 239 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 LINGO3P0C6S8 592 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 CCR4P51679 360 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 AIMP2Q13155 320 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 BLMHQ13867 455 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ACER2Q5QJU3 275 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF691Q5VV52 312 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 JMJD6Q6NYC1 403 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 C1orf94Q6P1W5 598 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 CD300LDQ6UXZ3 194 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 APLFQ8IW19 511 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 CADM2Q8N3J6 435 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ACOT11Q8WXI4 607 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 GTPBP3Q969Y2 492 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 SH2D2AQ9NP31 389 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ATP13A2Q9NQ11 1180 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 SCOCQ9UIL1 159 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 GMFGO60234 142 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 POU2F1P14859 743 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ENDOUP21128 410 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 PTNP21246 168 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 MST1P26927 711 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 IFNGR2P38484 337 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 CLK3P49761 638 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 UGT2B15P54855 530 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ESRRGP62508 458 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 RPP38P78345 283 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 COX10Q12887 443 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 KLHL17Q6TDP4 642 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 ZER1Q7Z7L7 766 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 HRASLS5Q96KN8 279 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 FER1L6-AS2Q96M78 137 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 UCK2Q9BZX2 261 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 HSPE1-MOB4S4R3N1 261 aa16.56■□□□□ 0.24
SMARCD3-202ENST00000356800 CHP2O43745 196 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 EPHA2P29317 976 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 CASP3P42574 277 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 IDH2P48735 452 aaKnown RBP16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 ISL1P61371 349 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 TOMM34Q15785 309 aaPredicted RBP16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 OR5M10Q6IEU7 315 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 ZNF730Q6ZMV8 503 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 MISPQ8IVT2 679 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 TMEM156Q8N614 296 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 SETD9Q8NE22 299 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 OR5W2Q8NH69 310 aa16.55■□□□□ 0.24
SMARCD3-202ENST00000356800 FBLIM1Q8WUP2 373 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms