RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KLHL42Q9P2K6 505 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 RBPJLQ9UBG7 517 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SHPKQ9UHJ6 478 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 ADH1BP00325 375 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 LIPCP11150 499 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 LIPAP38571 399 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 TSPAN31Q12999 210 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 NFATC4Q14934 902 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 P4HA3Q7Z4N8 544 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SIAH3Q8IW03 269 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 LSMEM2Q8N112 164 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 CBARPQ8N350 705 aaPredicted RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 GPR26Q8NDV2 337 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 MMABQ96EY8 250 aaPredicted RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 INTS14Q96SY0 518 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC22A11Q9NSA0 550 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRDV1A0A1B0GX56 115 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 NFKBIEO00221 500 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SCO2O43819 266 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 NDUFA6P56556 154 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 KIAA1024LP59773 190 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SOHLH1Q5JUK2 328 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 PIP5KL1Q5T9C9 394 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 TMUB2Q71RG4 321 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR52H1Q8NGJ2 320 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 TGIF2Q9GZN2 237 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 ERVMER34-1Q9H9K5 563 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 MYEF2Q9P2K5 600 aaKnown RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 LEFTY2O00292 366 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 CSO75390 466 aaKnown RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 FUT1P19526 365 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 LMAN2Q12907 356 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 MALLQ13021 153 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 MAVSQ7Z434 540 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ANKRD53Q8N9V6 530 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 CREB3L4Q8TEY5 395 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 BPIFA2Q96DR5 249 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 PTCHD1Q96NR3 888 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 SERTAD3Q9UJW9 196 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 A6NIZ1 184 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 AHRP35869 848 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 HCCSP53701 268 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 TAS2R30P59541 319 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAP1BP61224 184 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAP1AP62834 184 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 NLRP8Q86W28 1048 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ARFGAP1Q8N6T3 406 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ANGPTL6Q8NI99 470 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 DAZLQ92904 295 aaKnown RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 OCSTAMPQ9BR26 566 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 BTBD2Q9BX70 525 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 HHLA2Q9UM44 414 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 TUBAL3A6NHL2 446 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 TP53I11O14683 189 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF623O75123 536 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 TAS2R46P59540 309 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ILKQ13418 452 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF322Q6U7Q0 402 aaPredicted RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ERN2Q76MJ5 926 aaKnown RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR6F1Q8NGZ6 308 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 MYADMQ96S97 322 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 NAA11Q9BSU3 229 aaPredicted RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 VSTM2BA6NLU5 285 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 IMPA2O14732 288 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ARAFP10398 606 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 HTRA4P83105 476 aaPredicted RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 RIN1Q13671 783 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 YIF1BQ5BJH7 314 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF705AQ6ZN79 300 aaPredicted RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 Q6ZPB1 254 aaPredicted RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR6T1Q8NGN1 323 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF681Q96N22 645 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 CPNE7Q9UBL6 633 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 NDRG2Q9UN36 371 aaKnown RBP11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 ANTXRLA6NF34 631 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 PPP6CO00743 305 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 GASTP01350 101 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 GPLD1P80108 840 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 CARD17Q5XLA6 110 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR4D6Q8NGJ1 314 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 SORCS2Q96PQ0 1159 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 KPTNQ9Y664 436 aa11.94□□□□□ -0.5
SYNCRIP-201ENST00000355238 CD300LBA8K4G0 201 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAF1P04049 648 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR2A12Q8NGT7 310 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 ARNT2Q9HBZ2 717 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 SPO11Q9Y5K1 396 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 INSL5Q9Y5Q6 135 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 HHLA1C9JL84 531 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 HOXB5P09067 269 aa11.93□□□□□ -0.5
SYNCRIP-201ENST00000355238 GIPP09681 153 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms