RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TEAD3Q99594 435 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 FLRT3Q9NZU0 649 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 ADAM30Q9UKF2 790 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 PCDHGB7Q9Y5F8 929 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 HMX3A6NHT5 357 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 TFECO14948 347 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-201ENST00000351487 HCRTR1O43613 425 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 RDH16O75452 317 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 GSTT2P0CG29 244 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 GSTT2BP0CG30 244 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 SLC2A2P11168 524 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-201ENST00000351487 RBM34P42696 430 aaKnown RBP20.45■□□□□ 0.86
UPF3A-201ENST00000351487 Q8N402 240 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 SLC35B4Q969S0 331 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 ZC3HAV1LQ96H79 300 aaKnown RBP20.45■□□□□ 0.86
UPF3A-201ENST00000351487 C8orf33Q9H7E9 229 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-201ENST00000351487 STARD5Q9NSY2 213 aa20.45■□□□□ 0.86
UPF3A-201ENST00000351487 TRAV27A0A087WT01 109 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 A0A1B0GWA3 101 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 RIIAD1A6NNX1 92 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 SLC19A2O60779 497 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 IGHV4-34P06331 123 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 CELA2BP08218 269 aaPredicted RBP20.44■□□□□ 0.86
UPF3A-201ENST00000351487 S1PR1P21453 382 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 IFITM2Q01629 132 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 EIF2B5Q13144 721 aaKnown RBP20.44■□□□□ 0.86
UPF3A-201ENST00000351487 P2RY14Q15391 338 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 KLHL12Q53G59 568 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 GPALPP1Q8IXQ4 340 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 GRHL3Q8TE85 626 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 DNAJB12Q9NXW2 375 aaKnown RBP20.44■□□□□ 0.86
UPF3A-201ENST00000351487 HAO2Q9NYQ3 351 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 POMT2Q9UKY4 750 aa20.44■□□□□ 0.86
UPF3A-201ENST00000351487 DVL2O14641 736 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 OR10H2O60403 315 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 MT-ND5P03915 603 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 IL9P15248 144 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 F8A1P23610 371 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 KIR2DL3P43628 341 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 RAB30Q15771 203 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 TRIQKQ629K1 86 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 OR10H4Q8NGA5 316 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 TBX5Q99593 518 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 OR2B2Q9GZK3 357 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 SEMA6CQ9H3T2 930 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 FAM60AQ9NP50 221 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 USP36Q9P275 1121 aaKnown RBP20.43■□□□□ 0.86
UPF3A-201ENST00000351487 MMP17Q9ULZ9 603 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 RBMX2Q9Y388 322 aaKnown RBP20.43■□□□□ 0.86
UPF3A-201ENST00000351487 N6AMT1Q9Y5N5 214 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 PLPP2O43688 288 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 SBK2P0C263 348 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 ZNF3P17036 446 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 NOS3P29474 1203 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 ACAA2P42765 397 aaKnown RBP20.43■□□□□ 0.86
UPF3A-201ENST00000351487 TRAM1Q15629 374 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 LSMEM1Q8N8F7 131 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 OR5W2Q8NH69 310 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 OR4C6Q8NH72 309 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 SLC2A12Q8TD20 617 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 SNX18Q96RF0 628 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 NDC1Q9BTX1 674 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 TRIM2Q9C040 744 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 RNF121Q9H920 327 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 FOLH1BQ9HBA9 442 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 ADGRL4Q9HBW9 690 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 B3GAT2Q9NPZ5 323 aa20.43■□□□□ 0.86
UPF3A-201ENST00000351487 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-201ENST00000351487 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-201ENST00000351487 RGS13O14921 159 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ADAM11O75078 769 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ST6GAL1P15907 406 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 TAS2R43P59537 309 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 HBMQ6B0K9 141 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 NR2C2APQ86WQ0 139 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 C19orf18Q8NEA5 215 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 OR9A4Q8NGU2 314 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 OR51A7Q8NH64 312 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ENKURQ8TC29 256 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ARSGQ96EG1 525 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ART5Q96L15 291 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 UBL7Q96S82 380 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-201ENST00000351487 GPR27Q9NS67 375 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ZMIZ1Q9ULJ6 1067 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 REM1O75628 298 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 PEPDP12955 493 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 MYL9P24844 172 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 MAP2K3P46734 347 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 CAPZA2P47755 286 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 EMDP50402 254 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 RPS7P62081 194 aaKnown RBP20.42■□□□□ 0.86
UPF3A-201ENST00000351487 FHL1Q13642 323 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 IL18Q14116 193 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 CRMP1Q14194 572 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ZNHIT3Q15649 155 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-201ENST00000351487 RTL4Q6ZR62 310 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ZNF438Q7Z4V0 828 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 ZNF761Q86XN6 746 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-201ENST00000351487 FRMD6Q96NE9 622 aa20.42■□□□□ 0.86
UPF3A-201ENST00000351487 TMEM43Q9BTV4 400 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms