RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ANKRD19PQ9H560 264 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 AIG1Q9NVV5 245 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 VNN3Q9NY84 501 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 A3GALT2U3KPV4 340 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 TIMP1P01033 207 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 OR4D1Q15615 310 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 LIPNQ5VXI9 398 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 LIPJQ5W064 366 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ZDHHC14Q8IZN3 488 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 OR8S1Q8NH09 359 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 MYNNQ9NPC7 610 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 LAMP5Q9UJQ1 280 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 SLCO1B1Q9Y6L6 691 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 B4E171 279 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 FAM227AF5H4B4 570 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ARPC1BO15143 372 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 BPIP17213 487 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 EPHA5P54756 1037 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 TAS2R43P59537 309 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 MORN1Q5T089 497 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 KDM8Q8N371 416 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 OR10D4PQ8NGN7 298 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 MSLNLQ96KJ4 702 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF382Q96SR6 550 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 POPDC3Q9HBV1 291 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 RBBP9O75884 186 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ARSAP15289 507 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 GPR176Q14439 515 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 UNC50Q53HI1 259 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM225Q6GV28 225 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 METAP1DQ6UB28 335 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 TPRA1Q86W33 373 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 CSNK1A1LQ8N752 337 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 POLDIP3Q9BY77 421 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 RGPD2P0DJD1 1756 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 CBX7O95931 251 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 NTSR1P30989 418 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 DLX5P56178 289 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 DEFB103AP81534 67 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FOXO1Q12778 655 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 ASAH1Q13510 395 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 YIF1BQ5BJH7 314 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 UQCC3Q6UW78 93 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 TAS1R1Q7RTX1 841 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 OR6N2Q8NGY6 317 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FAM216AQ8WUB2 273 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PDE7BQ9NP56 450 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 CPNE7Q9UBL6 633 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 DUX1O43812 170 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FMO6PO60774 539 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 OR2C1O95371 312 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PFKLP17858 780 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PTBP1P26599 531 aaKnown RBP eCLIP10.44□□□□□ -0.742e-22■■■■■ 51.6
SMARCE1-202ENST00000348513 CD300CQ08708 224 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 SLAMF9Q96A28 289 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FKBP10Q96AY3 582 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 STRA6Q9BX79 667 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PARPBPQ9NWS1 579 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 KLHL9Q9P2J3 617 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 MYH13Q9UKX3 1938 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 C7orf72A4D263 438 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 EEF1E1-BLOC1S5C9J1V9 151 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 CAPNS1P04632 268 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC35E2BP0CK96 405 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 C5AR1P21730 350 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 HTR1EP28566 365 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 MRPL19P49406 292 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 DBX2Q6ZNG2 339 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 C1orf87Q8N0U7 546 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 MINDY1Q8N5J2 469 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PNPLA2Q96AD5 504 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 NOL4LQ96MY1 436 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 SFXN2Q96NB2 322 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 OPN3Q9H1Y3 402 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 BACE2Q9Y5Z0 518 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 CTDSP2O14595 271 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 CIDEAO60543 219 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC6A6P31641 620 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 SPCS3P61009 180 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FAM69BQ5VUD6 431 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FIGNL1Q6PIW4 674 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 FBXO46Q6PJ61 603 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 SHFQ7M4L6 423 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PXKQ7Z7A4 578 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 HORMAD2Q8N7B1 307 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 PEX11GQ96HA9 241 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 NCOR1P1Q9H4R4 102 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 AGPAT4Q9NRZ5 378 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 NLGN3Q9NZ94 848 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 GNG13Q9P2W3 67 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 IL17BQ9UHF5 180 aa10.44□□□□□ -0.74
SMARCE1-202ENST00000348513 DCDC2BA2VCK2 349 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 LINC00862A6NCI5 91 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 FLRT2O43155 660 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms