RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ERVK13-1Q9NX77 482 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 SPHK1Q9NYA1 384 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 TRAV27A0A087WT01 109 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 GABRR1P24046 479 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 INHBCP55103 352 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 SEC61A1P61619 476 aaKnown RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 VRK2Q86Y07 508 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 FAM217AQ8IXS0 508 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 UCN3Q969E3 161 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF845Q96IR2 970 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF587Q96SQ5 575 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 MICU1Q9BPX6 476 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 C1QTNF2Q9BXJ5 285 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 DHCR7Q9UBM7 475 aaKnown RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 WIF1Q9Y5W5 379 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 MT-CO2P00403 227 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 DNASE1P24855 282 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CD27P26842 260 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 HAGHLQ6PII5 290 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 TECPR1Q7Z6L1 1165 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 IL1F10Q8WWZ1 152 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 PIGCQ92535 297 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF775Q96BV0 537 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 OBP2AQ9NY56 170 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 TAS2R3Q9NYW6 316 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 SHOXO15266 292 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF264O43296 627 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 AGTR1P30556 359 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 TAZQ16635 292 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 GPR139Q6DWJ6 353 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 MOB3CQ70IA8 216 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PRSS48Q7RTY5 328 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 TEX19Q8NA77 164 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 OR11L1Q8NGX0 322 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ZFPM2Q8WW38 1151 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 SLC22A12Q96S37 553 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 APMAPQ9HDC9 416 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ZFP57Q9NU63 452 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 CYB5BO43169 146 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 OR8U9P0C7N5 309 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 OR1Q1Q15612 314 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF181Q2M3W8 571 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ZADH2Q8N4Q0 377 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 OR56B2PQ8NGI1 322 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PHF7Q9BWX1 381 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ATP13A2Q9NQ11 1180 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 VAPAQ9P0L0 249 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM184BQ9Y519 407 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-202ENST00000342494 HMX3A6NHT5 357 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 KDM4EB2RXH2 506 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ETV4P43268 484 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ATP1B3P54709 279 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 SIRPAP78324 504 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ENTPD8Q5MY95 495 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 AAED1Q7RTV5 226 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ARFGAP1Q8N6T3 406 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ADAMTS16Q8TE57 1224 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 SPIN2AQ99865 258 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 SPIN2BQ9BPZ2 258 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ARL6Q9H0F7 186 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PCDHGA7Q9Y5G6 932 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ANKRD34BA5PLL1 514 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 G3V3Y1 287 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 TRAPPC2LH3BP13 241 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ETV5P41161 510 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 TNFRSF17Q02223 184 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PAPD4Q6PIY7 484 aaKnown RBP14.04□□□□□ -0.16
UBE3B-202ENST00000342494 SLC16A9Q7RTY1 509 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 OR1S1Q8NH92 325 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 FOXN4Q96NZ1 517 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 VN1R3Q9BXE9 311 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 OR52D1Q9H346 318 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PCDHGA8Q9Y5G5 932 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 TRIM64CA6NLI5 447 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 DNAJB6O75190 326 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 F10P00742 488 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PSMB10P40306 273 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 CAV2P51636 162 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 PARM1Q6UWI2 310 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 ALKAL1Q6UXT8 129 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 POLE4Q9NR33 117 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 HHLA2Q9UM44 414 aa14.04□□□□□ -0.16
UBE3B-202ENST00000342494 NOSIPQ9Y314 301 aaKnown RBP14.04□□□□□ -0.16
UBE3B-202ENST00000342494 AK6Q9Y3D8 172 aaKnown RBP14.04□□□□□ -0.16
UBE3B-202ENST00000342494 GABBR2O75899 941 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 HTR5AP47898 357 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 GPR18Q14330 331 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 PCGF3Q3KNV8 242 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 VASNQ6EMK4 673 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 SGPP2Q8IWX5 399 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 LMNTD1Q8N9Z9 388 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 DUSP19Q8WTR2 217 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 S100PBPQ96BU1 408 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 UBE2ZQ9H832 354 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-202ENST00000342494 SLC6A20Q9NP91 592 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 C1GALT1Q9NS00 363 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 ACSS1Q9NUB1 689 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-202ENST00000342494 OR14J1Q9UGF5 321 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 ADAM29Q9UKF5 820 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms