RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NFATC1O95644 943 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 FOXK2Q01167 660 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 MFSD12Q6NUT3 480 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 NIPAL3Q6P499 406 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 CD200R1LQ6Q8B3 271 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF485Q8NCK3 441 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR11H7Q8NGC8 314 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR6K6Q8NGW6 343 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 PTP4A1Q93096 173 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 BPIFA2Q96DR5 249 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 COX14Q96I36 57 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 HHIPL1Q96JK4 782 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 HYLS1Q96M11 299 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 PDCD1LG2Q9BQ51 273 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 KRCC1Q9NPI7 259 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 MARK1Q9P0L2 795 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 MAFFQ9ULX9 164 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 GVINP1Q7Z2Y8 2422 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 CHP2O43745 196 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 TBX19O60806 448 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 HRGP04196 525 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 POLR2CP19387 275 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 GABRA3P34903 492 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 RPL4P36578 427 aaKnown RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 CCDC28AQ8IWP9 274 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 TTLQ8NG68 377 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR4K14Q8NGD5 310 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR5T3Q8NGG3 340 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR52E2Q8NGJ4 325 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR52N1Q8NH53 320 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 CLIP3Q96DZ5 547 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR51J1Q9H342 316 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 MTHFD2LQ9H903 347 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 GNG8Q9UK08 70 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 PLXNA2O75051 1894 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 RPP14O95059 124 aaKnown RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 EML2O95834 649 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 RAB3BP20337 219 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 AHCYP23526 432 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 DRD3P35462 400 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 FGL2Q14314 439 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF267Q14586 743 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 FAAP20Q6NZ36 180 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 PRSS41Q7RTY9 318 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OAFQ86UD1 273 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-201ENST00000340437 OR11H4Q8NGC9 324 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 C1QTNF2Q9BXJ5 285 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 AUNIPQ9H7T9 357 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 NIPAL2Q9H841 368 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 LRRK1Q38SD2 2015 aa13.36□□□□□ -0.27
CPSF7-201ENST00000340437 SPTBN2O15020 2390 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 A0A1W2PQU0 124 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 TCRBP04435 133 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 F8A1P23610 371 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 BMP8BP34820 402 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CLPPQ16740 277 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ADAMTSL4Q6UY14 1074 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF761Q86XN6 746 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CEP76Q8TAP6 659 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 SNX33Q8WV41 574 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 TSACCQ96A04 125 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ERMAPQ96PL5 475 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 EVA1BQ9NVM1 165 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 MRPS18AQ9NVS2 196 aaKnown RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 OR6C2Q9NZP2 312 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 SPEF1Q9Y4P9 236 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 TP53BP1Q12888 1972 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 KIAA1671Q9BY89 1806 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 DUXAA6NLW8 204 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 IMPA2O14732 288 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 RFPL3O75679 317 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 HTR2AP28223 471 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CST6Q15828 149 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF542PQ5EBM4 170 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 GJD3Q8N144 294 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 FRMD1Q8N878 549 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 BMPERQ8N8U9 685 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 HCAR2Q8TDS4 363 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CREB3L1Q96BA8 519 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 MSANTD3Q96H12 275 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 SDF2Q99470 211 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ASB6Q9NWX5 421 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 CLDND1Q9NY35 253 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF224Q9NZL3 707 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 POLHQ9Y253 713 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 GXYLT2A0PJZ3 443 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 TRAPPC13A5PLN9 417 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 H0Y8X5 98 aa13.35□□□□□ -0.27
CPSF7-201ENST00000340437 PEBP1P30086 187 aaKnown RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 TRA2BP62995 288 aaKnown RBP13.35□□□□□ -0.27
CPSF7-201ENST00000340437 RGS1Q08116 209 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms