RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TNFRSF10DQ9UBN6 386 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 SSR3Q9UNL2 185 aa9.39□□□□□ -0.91
RBFOX1-202ENST00000340209 SNTNA6NMZ2 147 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 J3QLW9 94 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 SYT5O00445 386 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 SCDO00767 359 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PLD2O14939 933 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 OIP5O43482 229 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 BRINP1O60477 761 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 GPX5O75715 221 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 NSA2O95478 260 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 F13BP05160 661 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 HBQ1P09105 142 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF19P17023 458 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 SOX6P35712 828 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ACVR1BP36896 505 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RPS25P62851 125 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF404Q494X3 552 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RNASE12Q5GAN4 147 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 LYPD4Q6UWN0 246 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 SPATC1Q76KD6 591 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 TMEM163Q8TC26 289 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF304Q9HCX3 659 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ERVK13-1Q9NX77 482 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RIIAD1A6NNX1 92 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 C12orf71A8MTZ7 269 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 OR5F1O95221 314 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ERVK-25P63136 954 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 EEF1A1P68104 462 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 MGAT2Q10469 447 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CRMP1Q14194 572 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PRTGQ2VWP7 1150 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF620Q6ZNG0 422 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RBM12BQ8IXT5 1001 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 A0A1B0GVC2 190 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 FAM86C2PA6NEL3 165 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 A6NIN4 97 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PRR23D1E9PI22 279 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CASKO14936 926 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PRR23D2P0DMB1 279 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RPS27P42677 84 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CLDN6P56747 220 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CFHR1Q03591 330 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PLCXD2Q0VAA5 305 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 COX10Q12887 443 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 HNRNPA0Q13151 305 aaKnown RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF829Q3KNS6 432 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 TCTE1Q5JU00 501 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 RPTNQ6XPR3 784 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF367Q7RTV3 350 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 POC5Q8NA72 575 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 HS6ST2Q96MM7 605 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 OPALINQ96PE5 141 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 KLHDC3Q9BQ90 382 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 TBL1XR1Q9BZK7 514 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CHRDQ9H2X0 955 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 APMAPQ9HDC9 416 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 COMMD3Q9UBI1 195 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 COPS7AQ9UBW8 275 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 IER3IP1Q9Y5U9 82 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 CDH10Q9Y6N8 788 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 PMF1-BGLAPU3KQ54 211 aa9.38□□□□□ -0.91
RBFOX1-202ENST00000340209 DAPL1A0PJW8 107 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF701M0R085 212 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 LAMTOR5O43504 91 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 HRO43593 1189 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TP53P04637 393 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 EMP3P54852 163 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 CD226Q15762 336 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 SSX1Q16384 188 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 FHL5Q5TD97 284 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 UBE2UQ5VVX9 321 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 USP43Q70EL4 1123 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 MARCH3Q86UD3 253 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF595Q8IYB9 648 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 GJD3Q8N144 294 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 CENPSQ8N2Z9 138 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TRMT61AQ96FX7 289 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TMEM185BQ9H7F4 350 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 GMEB1Q9Y692 573 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 CEP250Q9BV73 2442 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 PRODHO43272 600 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 SIGLEC6O43699 453 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 C12orf73Q69YU5 71 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TCEAL6Q6IPX3 200 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 HEPHL1Q6MZM0 1159 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 EGFL6Q8IUX8 553 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TMEM99Q8N816 258 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 SPRYD4Q8WW59 207 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TCEAL3Q969E4 200 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TSSK2Q96PF2 358 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 DOK1Q99704 481 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms