RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PPT2Q9UMR5 302 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 N6AMT1Q9Y5N5 214 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TCRBV9S1A1TA0A576 114 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 K7ERU9 68 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 DVL2O14641 736 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 VAMP5O95183 116 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 GADD45GO95257 159 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 GALTP07902 379 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CD3GP09693 182 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HSD17B1P14061 328 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ARNTP27540 789 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ETV5P41161 510 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PXNP49023 591 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MLF1P58340 268 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TAS2R19P59542 299 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ERVK-16P61578 105 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TFF2Q03403 129 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CAMK2BQ13554 666 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 XKR6Q5GH73 641 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HEPHL1Q6MZM0 1159 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CYP2R1Q6VVX0 501 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C3orf58Q8NDZ4 430 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR56A3Q8NH54 315 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC35B4Q969S0 331 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC29A1Q99808 456 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CRB3Q9BUF7 120 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 B3GNT5Q9BYG0 378 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PLEKHA3Q9HB20 300 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SMCO4Q9NRQ5 59 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ASH2LQ9UBL3 628 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 KCTD3Q9Y597 815 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CORINQ9Y5Q5 1042 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BACE2Q9Y5Z0 518 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MRPL42Q9Y6G3 142 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC9B1P1A6NJY1 282 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF705EA8MWA4 302 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RNASEK-C17orf49H0YIS7 233 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 AURKAO14965 403 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 B4GALT5O43286 388 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FAM155BO75949 473 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 LALBAP00709 142 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 F2P00734 622 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ORM2P19652 201 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RFX2P48378 723 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR4D2P58180 307 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RAB11AP62491 216 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 YPEL5P62699 121 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SERF2P84101 59 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 LTB4RQ15722 352 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TATDN3Q17R31 274 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MORN1Q5T089 497 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 PAPD4Q6PIY7 484 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC35D2Q76EJ3 337 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CLIP4Q8N3C7 705 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ANKRD53Q8N9V6 530 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 IL17RDQ8NFM7 739 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ALPK1Q96QP1 1244 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC38A1Q9H2H9 487 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 B3GAT1Q9P2W7 334 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NPIPA2E9PIF3 369 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 INMT-MINDY4F8WBC2 141 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NPIPA3F8WFD2 350 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MBTPS2O43462 519 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 NUDT21O43809 227 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RFPL2O75678 378 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BMP2P12643 396 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MYF5P13349 255 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HMGA1P17096 107 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RPS3P23396 243 aaKnown RBP eCLIP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 HTR1EP28566 365 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 GCH1P30793 250 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MMP15P51511 669 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BTG1P62324 171 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CLCQ05315 142 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 CHAF1BQ13112 559 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF211Q13398 564 aaPredicted RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM244Q5VVB8 128 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF585AQ6P3V2 769 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MAMDC4Q6UXC1 1216 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 DPY19L4Q7Z388 723 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 ZDHHC21Q8IVQ6 265 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 OR6V1Q8N148 313 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C15orf54Q8N8G6 183 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 RANBP9Q96S59 729 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 FUCA2Q9BTY2 467 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 EGLN1Q9GZT9 426 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 BCO1Q9HAY6 547 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MGAT4CQ9UBM8 478 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 SLC35A3Q9Y2D2 325 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 MRPS16Q9Y3D3 137 aaKnown RBP3.1□□□□□ -1.91
CSMD3-202ENST00000339701 WDR45Q9Y484 360 aa3.1□□□□□ -1.91
CSMD3-202ENST00000339701 C2orf92A0A1B0GVN3 265 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 LEFTY2O00292 366 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 FBP2O00757 339 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 HTR1AP08908 422 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 RAC2P15153 192 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TAL1P17542 331 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SHMT2P34897 504 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 MAP2K3P46734 347 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms