RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TMEM176BQ3YBM2 270 aaPredicted RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 RFTN2Q52LD8 501 aaPredicted RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 EXOSC6Q5RKV6 272 aaKnown RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 HMBOX1Q6NT76 420 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 CBLN3Q6UW01 205 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 RNF165Q6ZSG1 346 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 MTERF4Q7Z6M4 381 aaKnown RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 SLC43A2Q8N370 569 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 ZNF527Q8NB42 609 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 FBXO27Q8NI29 283 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 PIWIL2Q8TC59 973 aaKnown RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 ZFP90Q8TF47 636 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 FAM120BQ96EK7 910 aaKnown RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 HS6ST2Q96MM7 605 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 STACQ99469 402 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 TRIM2Q9C040 744 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 COQ10BQ9H8M1 238 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 SLC17A7Q9P2U7 560 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 BAIAP2L1Q9UHR4 511 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 GPC6Q9Y625 555 aaPredicted RBP13.87□□□□□ -0.19
LINC01116-202ENST00000339037 SVEP1Q4LDE5 3571 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 FREM1Q5H8C1 2179 aa13.87□□□□□ -0.19
LINC01116-202ENST00000339037 PLCE1Q9P212 2302 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 RNF212BA8MTL3 300 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 LSM1O15116 133 aaKnown RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 CD5LO43866 347 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 EFNA2O43921 213 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 ADAM11O75078 769 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 IFNA2P01563 188 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 HMGN2P05204 90 aaKnown RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 NUDT17P0C025 328 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 DDX5P17844 614 aaKnown RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 SLC7A1P30825 629 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 ASMTP46597 345 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 RNF144AP50876 292 aaPredicted RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 P2RX1P51575 399 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 SUMO3P55854 103 aaPredicted RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 GALNTL6Q49A17 601 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 SEZ6L2Q6UXD5 910 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 DNAJC14Q6Y2X3 702 aaPredicted RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 Q6ZT83 130 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 BHLHA15Q7RTS1 189 aaPredicted RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 ATP6V1C2Q8NEY4 427 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 CDS1Q92903 461 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 MTERF3Q96E29 417 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 TRMOQ9BU70 441 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 HOXD1Q9GZZ0 328 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 BARX1Q9HBU1 254 aaPredicted RBP13.86□□□□□ -0.19
LINC01116-202ENST00000339037 YAE1D1Q9NRH1 226 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 FAIMQ9NVQ4 179 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 GIN1Q9NXP7 522 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 KLHL9Q9P2J3 617 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 GIMAP2Q9UG22 337 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 ICAM5Q9UMF0 924 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 CARD8Q9Y2G2 431 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 TMED5Q9Y3A6 229 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 ACTL7BQ9Y614 415 aa13.86□□□□□ -0.19
LINC01116-202ENST00000339037 ANK2Q01484 3957 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 DPRXA6NFQ7 191 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 ZNF814B7Z6K7 855 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 OIP5O43482 229 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 SPAG7O75391 227 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 LYZL6O75951 148 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 CHEK2O96017 543 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 THBS1P07996 1170 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 PRKCAP17252 672 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 ENPP1P22413 925 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 ARRB2P32121 409 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 HPCAL1P37235 193 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 MLC1Q15049 377 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 STK11Q15831 433 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 UGT3A2Q3SY77 523 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 KLHL26Q53HC5 615 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 PODNL1Q6PEZ8 512 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 DNM1P46Q6ZS02 220 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 ZCCHC23Q6ZST2 131 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 R3HCC1LQ7Z5L2 792 aaKnown RBP13.85□□□□□ -0.19
LINC01116-202ENST00000339037 HIPK1Q86Z02 1210 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 DDIASQ8IXT1 998 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 RIBC1Q8N443 379 aaPredicted RBP13.85□□□□□ -0.19
LINC01116-202ENST00000339037 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 TWIST2Q8WVJ9 160 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 MRGPRX4Q96LA9 322 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 PIGUQ9H490 435 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 BCO1Q9HAY6 547 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 SIRT3Q9NTG7 399 aaPredicted RBP13.85□□□□□ -0.19
LINC01116-202ENST00000339037 LGALS13Q9UHV8 139 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 CR1P17927 2039 aa13.85□□□□□ -0.19
LINC01116-202ENST00000339037 IGHV3-15A0A0B4J1V0 119 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 NPIPA5A0A0B4J1W7 369 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 NPIPA7E9PJI5 369 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 GTPBP1O00178 669 aaKnown RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 PIP5K1BO14986 540 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 NPHS1O60500 1241 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 NDUFS7O75251 213 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 NPIPA8P0DM63 369 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 OR3A2P47893 321 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 CDH11P55287 796 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 RAC3P60763 192 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms