RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 WDR88Q6ZMY6 472 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 Q6ZTK2 550 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 MMP21Q8N119 569 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 ZNF664Q8N3J9 261 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 EDEM1Q92611 657 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 PHF21BQ96EK2 531 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 PBX4Q9BYU1 374 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 TM6SF2Q9BZW4 377 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 BEX1Q9HBH7 125 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 DNAJC4Q9NNZ3 241 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 DCP1AQ9NPI6 582 aaPredicted RBP8.05□□□□□ -1.12
TDP1-201ENST00000335725 UBQLN4Q9NRR5 601 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 C1orf109Q9NX04 203 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 PRG3Q9Y2Y8 225 aaPredicted RBP8.05□□□□□ -1.12
TDP1-201ENST00000335725 ATG4BQ9Y4P1 393 aa8.05□□□□□ -1.12
TDP1-201ENST00000335725 SCN11AQ9UI33 1791 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 A0A087WUJ7 227 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 CILPO75339 1184 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ELK1P19419 428 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PSMB1P20618 241 aaKnown RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 IL2RGP31785 369 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 SLC1A2P43004 574 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 FHITP49789 147 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PRRX1P54821 245 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 STXBP1P61764 594 aaKnown RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 RAB1AP62820 205 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 NRG1Q02297 640 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 ERN2Q76MJ5 926 aaKnown RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 GOLGA7Q7Z5G4 137 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 OR13C8Q8NGS7 320 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PIGXQ8TBF5 258 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 OR8D1Q8WZ84 308 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 DPH2Q9BQC3 489 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 MAGEB5Q9BZ81 275 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 MID1IP1Q9NPA3 183 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PDLIM7Q9NR12 457 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ICKQ9UPZ9 632 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ZFP30Q9Y2G7 519 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 FAM95CA0A1B0GW59 222 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 hCG_1809904A0A1W2PP81 198 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 A0A1W2PR64 198 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 A0A1W2PRV1 198 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 NKX6-3A6NJ46 265 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 MAN2B1O00754 1011 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 GRAP2O75791 330 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 OR2F2O95006 317 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ZNF682O95780 498 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 HLA-DOAP06340 250 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 EBLN1P0CF75 366 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 AKT1P31749 480 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 NAA10P41227 235 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 CTSOP43234 321 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 WNT3P56703 355 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 OR2F1Q13607 317 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 VEZF1Q14119 521 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 SLC36A2Q495M3 483 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 CRY2Q49AN0 593 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 TRMT1LQ7Z2T5 733 aaKnown RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 OR13D1Q8NGV5 346 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ZCCHC10Q8TBK6 192 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 RGMAQ96B86 450 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ADGRG7Q96K78 797 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 SYT4Q9H2B2 425 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 CPVLQ9H3G5 476 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 DKKL1Q9UK85 242 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 FZD10Q9ULW2 581 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 RPL36Q9Y3U8 105 aaKnown RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 ZCWPW2A0A1B0GU75 182 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 A0A1W2PPH5 198 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 J3QW42 95 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 CA11O75493 328 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 EPXP11678 715 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 DRD5P21918 477 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 BCKDHBP21953 392 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ACHEP22303 614 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 IDSP22304 550 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 MAS1LP35410 378 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 IFNGR2P38484 337 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 NHLH1Q02575 133 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 TMEM115Q12893 351 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 EIF4EBP2Q13542 120 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 TPBGQ13641 420 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 KHDC3LQ587J8 217 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 ZNF678Q5SXM1 525 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PRAMEF8Q5VWM4 474 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PRAMEF7Q5VXH5 474 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 GDPD4Q6W3E5 623 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 TMCO2Q7Z6W1 182 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 ACBD7Q8N6N7 88 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PNLDC1Q8NA58 520 aaKnown RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 RNF141Q8WVD5 230 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 WNT8BQ93098 351 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 VOPP1Q96AW1 172 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 CMBLQ96DG6 245 aa8.04□□□□□ -1.12
TDP1-201ENST00000335725 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
TDP1-201ENST00000335725 RNF2Q99496 336 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms