RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ERVK13-1Q9NX77 482 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 IGHV5-51A0A0C4DH38 117 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 SLC30A4O14863 429 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 RGS5O15539 181 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 DLGAP3O95886 979 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 GABRA5P31644 462 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 CASP3P42574 277 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 NR4A2P43354 598 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 TGM4P49221 684 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 FNTBP49356 437 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 NKX2-5P52952 324 aaPredicted RBP16.06■□□□□ 0.16
DDX28-201ENST00000332395 RUNX1T1Q06455 604 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 DEFB133Q30KQ1 61 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 NIPAL3Q6P499 406 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 C17orf82Q86X59 251 aaPredicted RBP16.06■□□□□ 0.16
DDX28-201ENST00000332395 KLHL36Q8N4N3 616 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 ZFP41Q8N8Y5 198 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 NACC2Q96BF6 587 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 KCTD7Q96MP8 289 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 CHRDQ9H2X0 955 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 Q9N2J8 555 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 TNFRSF10DQ9UBN6 386 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 ERVK-19Q9WJR5 959 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 CAB39Q9Y376 341 aaPredicted RBP16.06■□□□□ 0.16
DDX28-201ENST00000332395 TLCD2A6NGC4 264 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 CCDC85CA6NKD9 419 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 LOC110117498-PIK3R3F6TDL0 507 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 ZNF749O43361 778 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 PTTG1O95997 202 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 MSL3P1P0C860 447 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 SPNP16150 400 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 PGDP52209 483 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 NNATQ16517 81 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 ZNF791Q3KP31 576 aaPredicted RBP16.05■□□□□ 0.16
DDX28-201ENST00000332395 CRTC2Q53ET0 693 aaPredicted RBP16.05■□□□□ 0.16
DDX28-201ENST00000332395 QSOX2Q6ZRP7 698 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 OR51G2Q8NGK0 314 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 ZNF426Q9BUY5 554 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 IFT27Q9BW83 186 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 JAM3Q9BX67 310 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 TRIM2Q9C040 744 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 TP63Q9H3D4 680 aaPredicted RBP16.05■□□□□ 0.16
DDX28-201ENST00000332395 MED20Q9H944 212 aa16.05■□□□□ 0.16
DDX28-201ENST00000332395 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.05■□□□□ 0.16
DDX28-201ENST00000332395 TMEM184BQ9Y519 407 aaPredicted RBP16.05■□□□□ 0.16
DDX28-201ENST00000332395 MN1Q10571 1320 aaPredicted RBP16.05■□□□□ 0.16
DDX28-201ENST00000332395 TRAV27A0A087WT01 109 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 IQCMA0A1B0GVH7 501 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 SYNDIG1LA6NDD5 238 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 J3QRE1 110 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 SNX4O95219 450 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 CT45A8P0DMV1 189 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 CT45A9P0DMV2 189 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 PAICSP22234 425 aaKnown RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 FGFBP1Q14512 234 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 ZNF141Q15928 474 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 CT45A2Q5DJT8 189 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 ALG10BQ5I7T1 473 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 B3GLCTQ6Y288 498 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 CADM4Q8NFZ8 388 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 OR52N1Q8NH53 320 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 OR51Q1Q8NH59 317 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 C16orf52Q8NHV5 167 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 G6PC3Q9BUM1 346 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 PDE7BQ9NP56 450 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 CMC2Q9NRP2 79 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 FAM86C2PA6NEL3 165 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 NPIPB9F8W1W9 429 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 AKAP8O43823 692 aaKnown RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 SDC3O75056 442 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 HSD17B7P56937 341 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 FOXK2Q01167 660 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 FABP5Q01469 135 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 RPL6Q02878 288 aaKnown RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 ACSM1Q08AH1 577 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 HNRNPA0Q13151 305 aaKnown RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 TCTE1Q5JU00 501 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 PRPF38BQ5VTL8 546 aaKnown RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 CD200R1LQ6Q8B3 271 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 MEPCEQ7L2J0 689 aaKnown RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 LSMEM1Q8N8F7 131 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 OR51A7Q8NH64 312 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 SPRYD4Q8WW59 207 aaPredicted RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 ASB15Q8WXK1 588 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 ZNF578Q96N58 590 aaPredicted RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 SDHCQ99643 169 aaPredicted RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 HCAR1Q9BXC0 346 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 FOXQ1Q9C009 403 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 SPRTNQ9H040 489 aaPredicted RBP16.04■□□□□ 0.16
DDX28-201ENST00000332395 OR10A5Q9H207 317 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 NEK6Q9HC98 313 aa16.04■□□□□ 0.16
DDX28-201ENST00000332395 CACNA1IQ9P0X4 2223 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 ZC3H12DA2A288 527 aaKnown RBP16.03■□□□□ 0.16
DDX28-201ENST00000332395 LMO7DNF2Z398 122 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 HCN1O60741 890 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 PTP4A3O75365 173 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 IFNA16P05015 189 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 NGFRP08138 427 aa16.03■□□□□ 0.16
DDX28-201ENST00000332395 CLEC2LP0C7M8 214 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms