RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZNF559Q9BR84 538 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 TACO1Q9BSH4 297 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 ACTRT3Q9BYD9 372 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 TBL1XR1Q9BZK7 514 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 NMUR2Q9GZQ4 415 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ANKRA2Q9H9E1 313 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 MEAF6Q9HAF1 191 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 GCM1Q9NP62 436 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 POLE3Q9NRF9 147 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FBXL2Q9UKC9 423 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 EDARQ9UNE0 448 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CAMK2AQ9UQM7 478 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 HECTD1Q9ULT8 2610 aa5.71□□□□□ -1.49
SMG1-201ENST00000330588 DNAJC13O75165 2243 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 NINQ8N4C6 2090 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 RP1L1Q8IWN7 2480 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 FLNCQ14315 2725 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 BOLA2-SMG1P6H3BVE0 249 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 AKAP10O43572 662 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 PEX11AO75192 247 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 OXSR1O95747 527 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 ANGPTL1O95841 491 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 AGR2O95994 175 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 SCG5P05408 212 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 TMIGD3P0DMS9 266 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 CREB1P16220 341 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 SLC1A6P48664 564 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 CCT3P49368 545 aaKnown RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 SH3BGRP55822 239 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 DLX5P56178 289 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 PCBP3P57721 371 aaKnown RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 KRT72Q14CN4 511 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 TOMM20Q15388 145 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 CHI3L2Q15782 390 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 PDCD2Q16342 344 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 GRAMD1BQ3KR37 738 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 FLYWCH1Q4VC44 716 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 CEP85LQ5SZL2 805 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 ANXA8L1Q5VT79 327 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 IL23RQ5VWK5 629 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 ZCCHC23Q6ZST2 131 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 YRDCQ86U90 279 aaKnown RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 LIX1LQ8IVB5 337 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 GTPBP8Q8N3Z3 284 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 SLC16A11Q8NCK7 471 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 NAXEQ8NCW5 288 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 OR7A2PQ8NGA2 310 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 GPR151Q8TDV0 419 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 RMND5BQ96G75 393 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 TRIB1Q96RU8 372 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 SORT1Q99523 831 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 DUSP26Q9BV47 211 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 UCK2Q9BZX2 261 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 DSN1Q9H410 356 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 GLRX2Q9NS18 164 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 ZCCHC3Q9NUD5 404 aaKnown RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 THAP1Q9NVV9 213 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 ZMAT5Q9UDW3 170 aaKnown RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 BAIAP2L1Q9UHR4 511 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 FAF1Q9UNN5 650 aaPredicted RBP5.71□□□□□ -1.5
SMG1-201ENST00000330588 FIS1Q9Y3D6 152 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 RELNP78509 3460 aa5.71□□□□□ -1.5
SMG1-201ENST00000330588 SPTAN1Q13813 2472 aaKnown RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 GXYLT2A0PJZ3 443 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 TRPC5OSA6NMA1 111 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 CLCA1A8K7I4 914 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 B4DXG7 233 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 NPIPB9F8W1W9 429 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 H3BNH8 94 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SCDO00767 359 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 KLF11O14901 512 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 ANKRD28O15084 1053 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 PRODHO43272 600 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SCO2O43819 266 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SNNO75324 88 aaPredicted RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 SKAP2O75563 359 aaPredicted RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 MTRF1O75570 445 aaKnown RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 IGKV1D-16P01601 117 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 HMGN2P05204 90 aaKnown RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 THBDP07204 575 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 LAMP1P11279 417 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 LBPP18428 481 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 HK1P19367 917 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 POU3F2P20265 443 aaPredicted RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 GNALP38405 381 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 EIF1P41567 113 aaKnown RBP5.7□□□□□ -1.5
SMG1-201ENST00000330588 COX10Q12887 443 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 STX3Q13277 289 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 TP53BP2Q13625 1128 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 GUSBP1Q15486 140 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 DUSP5Q16690 384 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 KLHL26Q53HC5 615 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SLC25A53Q5H9E4 307 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SLC35F1Q5T1Q4 408 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 ATG16L1Q676U5 607 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SPNS3Q6ZMD2 512 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 SPATA19Q7Z5L4 167 aa5.7□□□□□ -1.5
SMG1-201ENST00000330588 WDR53Q7Z5U6 358 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms