RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PRAMEF9Q5VWM5 478 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM200BQ69YZ2 307 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PLAG1Q6DJT9 500 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TRIM40Q6P9F5 258 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 IKBIPQ70UQ0 350 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 MAMDC2Q7Z304 686 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 HSD11B1LQ7Z5J1 315 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TSEN54Q7Z6J9 526 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 VTCN1Q7Z7D3 282 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 MRGPREQ86SM8 312 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TSPAN33Q86UF1 283 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ZBTB46Q86UZ6 589 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ANKRD46Q86W74 232 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 HEATR4Q86WZ0 1026 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 METTL4Q8N3J2 472 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 LINC00471Q8N535 108 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PARP16Q8N5Y8 322 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SLC5A8Q8N695 610 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 GPR26Q8NDV2 337 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 IL17RDQ8NFM7 739 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 OR56A3Q8NH54 315 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ASZ1Q8WWH4 475 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 RASSF5Q8WWW0 418 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 KIAA1143Q96AT1 154 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 MTFMTQ96DP5 389 aaKnown RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF486Q96H40 463 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 EGLN2Q96KS0 407 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 Q96MT0 163 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PIP5K1AQ99755 562 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 EFCAB11Q9BUY7 163 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TRAF4Q9BUZ4 470 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TAPBPLQ9BX59 468 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 C1QTNF7Q9BXJ2 289 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TEX101Q9BY14 249 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 NUAK2Q9H093 628 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 REEP4Q9H6H4 257 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM165Q9HC07 324 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ISYNA1Q9NPH2 558 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 CCDC177Q9NQR7 707 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ABCB10Q9NRK6 738 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 RASSF1Q9NS23 344 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 IMPAD1Q9NX62 359 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 SLC39A1Q9NY26 324 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF226Q9NYT6 803 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 EHD3Q9NZN3 535 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 B4GALT6Q9UBX8 382 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PFDN2Q9UHV9 154 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TUBD1Q9UJT1 453 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 KCND3Q9UK17 655 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 STUB1Q9UNE7 303 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ICKQ9UPZ9 632 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 TP53TG5Q9Y2B4 290 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 ENPP4Q9Y6X5 453 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 PCM1Q15154 2024 aa4.54□□□□□ -1.68
CKS1B-201ENST00000308987 DSPPQ9NZW4 1301 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TRBV23-1A0A0A0MS06 115 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 IQCMA0A1B0GVH7 501 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 IRGMA1A4Y4 181 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 EFCAB7A8K855 629 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GABRR3A8MPY1 467 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF891A8MT65 544 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 B4E171 279 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 KMOO15229 486 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GPR39O43194 453 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SGTAO43765 313 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TRIM3O75382 744 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CCNB2O95067 398 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 LRATO95237 230 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CPSF4O95639 269 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 VIPP01282 170 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 STSP08842 583 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ELFN1P0C7U0 828 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GAAP10253 952 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 DBTP11182 482 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CYP2A6P11509 494 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 APEX1P27695 318 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 EPHA2P29317 976 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 C21orf33P30042 268 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CSTF2P33240 577 aaKnown RBP eCLIP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CA5AP35218 305 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 DDOSTP39656 456 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TSPAN7P41732 249 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GPR3P46089 330 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 GSTM5P46439 218 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SPINT3P49223 89 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 NEK2P51955 445 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CRYBA2P53672 197 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CRISP1P54107 249 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 RAE1P78406 368 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 CDK3Q00526 305 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 MC2RQ01718 297 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 EEF1A2Q05639 463 aaKnown RBP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF763Q0D2J5 394 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 COX10Q12887 443 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 TRA2AQ13595 282 aaKnown RBP eCLIP4.53□□□□□ -1.68
CKS1B-201ENST00000308987 SCARB2Q14108 478 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 DOC2AQ14183 400 aa4.53□□□□□ -1.68
CKS1B-201ENST00000308987 NDUFA9Q16795 377 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms