RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MVDP53602 400 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 FGFBP1Q14512 234 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF239Q16600 458 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 PDCD4Q53EL6 469 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 AGBL2Q5U5Z8 902 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 ATG16L1Q676U5 607 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF614Q8N883 585 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 TOR1AIP2Q8NFQ8 470 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF75CPQ92670 426 aaPredicted RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 ROPN1LQ96C74 230 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 GMPPAQ96IJ6 420 aaPredicted RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 MRGPRX4Q96LA9 322 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 WFIKKN1Q96NZ8 548 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 SLC35A5Q9BS91 424 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 LAT2Q9GZY6 243 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 PLSCR4Q9NRQ2 329 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 PAQR5Q9NXK6 330 aaPredicted RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 PCDHGB4Q9UN71 923 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 FLNAP21333 2647 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 C2CD3Q4AC94 2353 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 DEFB108AA8MXU0 73 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 H3BNH8 94 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 LOXP28300 417 aaPredicted RBP17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 SFTPDP35247 375 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 UGT2B10P36537 528 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 QPRTQ15274 297 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 HBMQ6B0K9 141 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 LSRQ86X29 649 aaPredicted RBP17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 RNF130Q86XS8 419 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 VPS37AQ8NEZ2 397 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 OR6K3Q8NGY3 331 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 PIWIL2Q8TC59 973 aaKnown RBP17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 RNF128Q8TEB7 428 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 XAGE5Q8WWM1 108 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 OIT3Q8WWZ8 545 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 OSTF1Q92882 214 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 POLE3Q9NRF9 147 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 SDR39U1Q9NRG7 319 aaPredicted RBP17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 CCM2LQ9NUG4 571 aaPredicted RBP17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 EXD2Q9NVH0 621 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 ELOVL5Q9NYP7 299 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 STOML1Q9UBI4 398 aa17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 ING1Q9UK53 422 aaPredicted RBP17.71■□□□□ 0.43
PDZRN3-202ENST00000308537 CCDC154A6NI56 674 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 SLCO1B7G3V0H7 640 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 H6PDO95479 791 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 ART1P52961 327 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 CHRNEQ04844 493 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 TTMPQ5BVD1 217 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 COX20Q5RI15 118 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 PAMR1Q6UXH9 720 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 C16orf62Q7Z3J2 963 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 ZNF619Q8N2I2 560 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 GLB1L3Q8NCI6 653 aaPredicted RBP17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 OR9I1Q8NGQ6 314 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 OR52E6Q96RD3 313 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 FOXC2Q99958 501 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 THUMPD3Q9BV44 507 aaKnown RBP17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 QRSL1Q9H0R6 528 aaKnown RBP17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 SLC38A1Q9H2H9 487 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 MCTS1Q9ULC4 181 aaKnown RBP17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 PROCRQ9UNN8 238 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 PLEKHA6Q9Y2H5 1048 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 WDR45Q9Y484 360 aa17.7■□□□□ 0.42
PDZRN3-202ENST00000308537 CLDN24A6NM45 220 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 GTPBP1O00178 669 aaKnown RBP17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 NUDT14O95848 222 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 AGR2O95994 175 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 GSNP06396 782 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 CHRM4P08173 479 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 KLK2P20151 261 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ME2P23368 584 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 AGTR1P30556 359 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 KHKP50053 298 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 SELENBP1Q13228 472 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 POU4F3Q15319 338 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 TMEM176BQ3YBM2 270 aaPredicted RBP17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 HMGN2P46Q86SG4 172 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ANKFN1Q8N957 763 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 RFWD2Q8NHY2 731 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ZFP90Q8TF47 636 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ABHD3Q8WU67 409 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ROBO4Q8WZ75 1007 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 PANX1Q96RD7 426 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 KLHL28Q9NXS3 571 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ARID1AO14497 2285 aa17.69■□□□□ 0.42
PDZRN3-202ENST00000308537 ATE1O95260 518 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 CSTAP01040 98 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 THBDP07204 575 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 UBTFL6P0CB48 400 aaPredicted RBP17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 POU2F1P14859 743 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 IDO1P14902 403 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 HOXB9P17482 250 aaPredicted RBP17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 RPS4Y1P22090 263 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 CARD18P57730 90 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 SESN3P58005 492 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 CBFBQ13951 182 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 SYPL1Q16563 259 aa17.68■□□□□ 0.42
PDZRN3-202ENST00000308537 TIGD2Q4W5G0 525 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms